Parabacteroides absconsus: NEE14_013240
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Entry
NEE14_013240 CDS
T10821
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00190
Oxidative phosphorylation
pabc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
NEE14_013240
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEE14_013240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pabc03019
]
NEE14_013240
Enzymes [BR:
pabc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
NEE14_013240
Messenger RNA biogenesis [BR:
pabc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NEE14_013240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
DUF5813
TetR_C_8
Motif
Other DBs
NCBI-ProteinID:
WWV65945
UniProt:
A0ABZ2IIS2
LinkDB
All DBs
Position
3128884..3130956
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AA seq
690 aa
AA seq
DB search
MKIKENKNYLPRDISWMYFNRRILQEACKDNVPLLERLSFLGIYSNNLDEFFRVRVASQS
RIAECEDKAAQKNKREALAILKEINKLNAEYSKEYEQAIREVTQRLRDENIYLLRDDEVD
DEQRAFIKNFYMQHLNGAVIPVWFSAIKQLDVENDENIYLAVRMFKKNTKKRNQEYAFLS
LPVNTCGRFLRLPDKGEKRYLMYLDDVIRCCLPMIFCGQDFTDYEAYSFKFTRDAEMEID
NDLRNGMLQKISKGVKSRKRGEPLRVVYDSTMPKGLLKQVLSTLCLDKLDTVLAGGRYHN
HKDLMKFPDCGRKDLKYPTWTPILKDELSGTESILKLIREKDRFIHVPYHSFDSYVRVLQ
EAAVSKEVKSIKTTLYRLAKDSKVVKALIGAARNGKKVTVVIELLARFDEASNIDWSKKM
QDAGIHVIFGVEGLKVHSKITHISMRSGTDIVCISTGNFHEGNARTYTDYMLMTASKPIV
KDVNAVFDFIERPYSPIRFKELLVSPNEMRQKFIRLINEEIRNKEAGKPAYIKIKINHIT
DVFMVRKLYEAAERGVPVDLLVRGNCSLFTELPELNGNLRIRGIIDRYLEHSRIFIFAAG
GIDKTFIGSADWMPRNLDNRIEVITPVYDPEIKADLRQVVEYGLNDTLQGRIVDGTGENR
MPDQTEEGVFRSQEALYNYYLSKEEENTHK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaggaaaacaaaaactatttgccaagagatatcagttggatgtatttcaac
cggcgaattttgcaggaagcatgtaaagacaatgttcccttgttggagcgtttgtcgttt
ttgggtatctattcgaacaacttggatgaattcttccgggttcgcgtagcttcccagagt
cggattgctgaatgtgaggataaagctgcccagaagaataaacgggaagccttggcaatc
ttgaaagaaatcaacaagctgaatgccgaatattccaaagaatacgagcaggcgatccgg
gaagtcacccagcgactgagagatgagaatatttatctcttgcgtgacgatgaggtagat
gatgaacaacgtgctttcatcaagaacttttatatgcagcatctgaacggagccgtcatt
ccggtctggttttctgccatcaagcaactggatgttgagaacgatgagaatatttatctg
gccgtcagaatgttcaagaagaacaccaagaaacggaatcaggagtatgcgtttctgtct
ttgcccgtgaatacttgcgggcgtttcctccgcttgccggataaaggagagaagcgttat
ctgatgtatctggatgatgtgatccgctgctgtctgccgatgatcttctgcggacaggac
tttacggattatgaggcttattcctttaagtttacacgcgatgccgaaatggaaatcgac
aatgacttacggaacggtatgctgcaaaagatatccaaaggcgtgaaaagccgtaaacgg
ggcgaaccgcttcgcgtggtgtacgattcaactatgccgaaaggcttgttgaagcaggta
ctttctaccttatgcctggataaactggataccgtcctggccggtggccgctatcacaac
cataaagatttgatgaagttcccggactgcgggcggaaggatctgaaatatccgacatgg
acgccgattctgaaagacgaactgtcgggaacggaaagtattctaaagctgatccgcgag
aaagaccgcttcatccatgtgccttatcatagcttcgattcctatgtacgtgtattgcag
gaagctgccgtgagcaaggaagtaaagagcatcaaaacgacgctttaccgcttggctaaa
gattcgaaagtcgtgaaagccctgatcggtgctgcacggaatggcaagaaagtgacggta
gttattgaactattggcccgctttgatgaggcttccaatattgactggtcgaagaagatg
caggatgccggcattcatgtgatcttcggtgtggaaggactgaaggtacattccaagata
actcatatatccatgcgttcaggtacagatatcgtttgtatcagtacaggtaacttccat
gaaggaaatgcccggacttatacggattatatgttgatgacggcttcaaaaccgatcgtg
aaggatgtcaatgccgtatttgacttcatcgaacgtccttattctccgattcgtttcaag
gaactgctggtttcaccgaatgagatgaggcagaagtttatccggctgatcaatgaggaa
atccgcaataaggaggccggaaaaccggcttatatcaaaataaagatcaaccacatcacg
gatgtattcatggtacgtaagctgtatgaagctgccgaacgaggtgtgcccgttgatctg
ctggttcgtggaaactgctctttatttacagaattgcctgaactgaatggcaacttacgt
atccggggcattattgaccgttatctggagcattcccgtatctttatctttgctgccggc
ggaattgataagactttcatcggttcggctgactggatgccgagaaacctggataaccgg
attgaagtgattacgcctgtatacgatccggagataaaggctgatctgcgacaggttgtg
gaatatggattgaatgatacgctgcaagggcggattgtagacggaacaggagaaaacaga
atgcctgatcagactgaagaaggtgttttccgttcgcaggaagctctctataactattat
ctgtcgaaagaagaagaaaatacacacaaataa
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