Salipiger abyssi: Ga0080574_TMP3074
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Entry
Ga0080574_TMP3074 CDS
T04681
Name
(GenBank) exodeoxyribonuclease-3
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
paby
Salipiger abyssi
Pathway
paby03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ga0080574_TMP3074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paby03400
]
Ga0080574_TMP3074
Enzymes [BR:
paby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Ga0080574_TMP3074
DNA repair and recombination proteins [BR:
paby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Ga0080574_TMP3074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
APZ53408
UniProt:
A0A1P8UVK2
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All DBs
Position
2481341..2482129
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AA seq
262 aa
AA seq
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MPFTLATWNINSVRLREALVAKLLAEETPDVLCLQECKSPVDKIPMEQFRELGYGHIVAR
GQKGYNGVAILSKQPLRDLGDKDFAGLGHARHIAAELENGVTIHNFYVPAGGDVPDREKN
EKFGQKLDYLAEMRDWFASERPGKAILVGDLNIAPREDDVWSHKQLLKVVSHTPVEVEAL
GATQEAGGWVDITRKDIPEGQLYSWWSYRARDWDAADKGRRLDHIWATPDIAGAGHDSRI
LRAARGWEKPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcacattggccacctggaatatcaactccgtccgcctgcgcgaggctctggtg
gccaagctgctcgccgaagagacgcccgacgtgctctgcctgcaggaatgcaagagcccg
gtcgacaagatcccgatggagcagttccgcgagctcggctatggccatatcgtggcgcgc
gggcagaaggggtacaacggtgtggcgatcctgtcgaaacagccgctgcgcgatttgggc
gacaaggatttcgccgggctcggccacgcccgccacatcgccgccgagctggaaaacggc
gtgacgatccataatttctacgtgcccgcgggcggcgatgtgcccgaccgcgagaaaaac
gagaaattcggccagaagctcgactacctcgccgagatgcgcgactggttcgccagtgag
cggcccggcaaggcgatcctggtgggcgatctcaacattgccccgcgcgaggacgatgtg
tggtcgcacaagcagctgctcaaggtggtctcgcacaccccggtcgaggtcgaggcgctg
ggcgccacgcaggaggccggtggctgggtcgatatcacccgcaaggacattcccgagggg
cagctttattcctggtggtcctaccgcgcccgcgactgggacgcggcggacaagggccgg
cggctcgatcacatctgggcgacaccggatatcgcgggcgccggccacgacagccgcatc
ctgcgcgccgcgcgcggctgggaaaaaccctccgatcatgcgccggtgtttgcgaccttc
gatctgtga
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