Salipiger abyssi: Ga0080574_TMP3112
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Entry
Ga0080574_TMP3112 CDS
T04681
Name
(GenBank) farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
paby
Salipiger abyssi
Pathway
paby00900
Terpenoid backbone biosynthesis
paby01100
Metabolic pathways
paby01110
Biosynthesis of secondary metabolites
Module
paby_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Ga0080574_TMP3112
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
paby01006
]
Ga0080574_TMP3112
Enzymes [BR:
paby01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Ga0080574_TMP3112
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Ga0080574_TMP3112
Prenyltransferases [BR:
paby01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Ga0080574_TMP3112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
APZ53446
UniProt:
A0A1P8UVS3
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All DBs
Position
complement(2520206..2521075)
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AA seq
289 aa
AA seq
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MFSESLEAGAGAVADHFDMVLSGFADLPVTHAMRYAVTGGKGLRGWLVLESARLHEVPQA
QALWPACAIEAIHAYSLVHDDLPCMDDDALRRGLPTVHRKWDEATAVLAGDALQALGFEM
LGDPRCHERAEVRADLTLSLARAAGARGMVLGQALDMAAESTATPLTLDEITALQAGKTG
ALILWSAEAGARLAEADLAPLTAYAQGLGLAFQIADDILDVEGDAATVGKAVGKDADRGK
ATFVSLLGLDGAKARAQTLVTEACDALSPYGKRADTLREAARFVISRRN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgagtctctggaggccggcgcaggcgccgtggccgaccatttcgacatggtg
ctgagcggtttcgccgatctgccggtgacccatgcgatgcgctacgcggtgaccggcggc
aagggtctgcgcggctggctggtgctggaaagcgcccggctgcacgaggtaccgcaggcg
caggcgctctggcccgcctgtgccatcgaggcgatccacgcctacagcctcgtgcatgac
gatctgccctgcatggacgacgacgcgctgcgccggggcctgccgacggtgcatcgcaaa
tgggacgaggcgaccgccgtgctggcgggcgacgcgctccaggcgctcggtttcgagatg
ctgggggacccgcgctgccatgagcgcgccgaggtgcgcgccgatctgacgctgagcctt
gcgcgggcggcgggggcgcgcggcatggtgctgggacaggcgctggacatggccgccgaa
agcaccgccacgccgctcacgctggacgagatcaccgcccttcaggccggcaagaccggc
gcgctgatcctgtggtcggcagaggccggcgcgcggctggctgaggccgatctggcacca
ctcaccgcctatgcgcagggcctcgggctcgccttccagatcgccgacgacattctcgat
gtcgagggcgacgcggcgacggtcggcaaggcggtcggcaaggatgcggatcgcggcaag
gcgacctttgtgtcgctgctcgggctcgacggcgcaaaggcgcgtgcacaaacccttgtg
acagaggcctgcgacgccctatctccctatggtaaacgggccgataccttgcgggaggcc
gcccgtttcgttatctcccgccggaactga
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