Candidatus Paracaedibacter acanthamoebae: ID47_07605
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Entry
ID47_07605 CDS
T03232
Name
(GenBank) hypothetical protein
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
paca
Candidatus Paracaedibacter acanthamoebae
Pathway
paca00300
Lysine biosynthesis
paca00550
Peptidoglycan biosynthesis
paca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ID47_07605
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ID47_07605
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paca01011
]
ID47_07605
Enzymes [BR:
paca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ID47_07605
Peptidoglycan biosynthesis and degradation proteins [BR:
paca01011
]
Precursor biosynthesis
Amino acid ligase
ID47_07605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
AIK96615
UniProt:
A0A077B0Z5
LinkDB
All DBs
Position
complement(1596296..1597759)
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AA seq
487 aa
AA seq
DB search
MKLKSLIKSIALSTFGELDVVDIKLSANTVNRGDLFVCLEELNIPHIEDEVRTASFRGAS
CIILAVPLKSLITFNKIPIFKVDNIRKLLSEMASNFYPSSIPNIIGVTGTYGKTSTVSFI
RQLLNSLDYNVGSLGTLGLWIKETELGSFPRIMTTPPAIYIHYILHYLSARRVDYFAMEV
TSHGLDRHRLDDVLFKVGLFTNFGASHLDYHQSMEHYYASKRKFFSEVLEPSAVGVFNSE
QSWSNDILSICRDRRIKSVLIGKDLRVEHSVVNSEGTELTINCFGEKKNIHIPFISTFQT
ENILFSIGSLIGLNKDIGLVLDSVSKLKSVEGRMELVCSKNGAPIFVDFAHRPETFEKIF
QPLKEQGKNIVLVFGCGGGGNKECRTLLGKIAAKYATRVIVTDDNARNEDPRQIRRMILQ
GCPKAIEIPDRRNAIYTALEGLTENDVCIVAGRGSEEIQVIKGKEIAFNDKAEILKALST
IDFTLTS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaatcattaataaagtcaattgctctttcaactttcggggaattggacgtc
gtagatataaagttatcagcaaatactgttaacagaggggatttatttgtatgccttgaa
gaattaaatataccccatattgaagatgaagtgcgaactgcctcttttagaggggcatct
tgtattatattggctgtacccttaaagagcttaatcacatttaataaaatacctatcttc
aaggtcgataatatacgtaaacttctaagcgaaatggcatccaatttttatcctagttct
atacctaacatcataggtgttacaggaacctatggaaaaacatcaacagtatcttttatt
agacaacttttaaattcgctcgattataatgttggaagcttaggaacgctaggtttatgg
attaaagagacagagttaggctcgtttccaagaatcatgactaccccacctgcaatttat
attcattatatactccactacctttctgcaagaagggtagattattttgctatggaggtt
accagtcatggattagacagacatcgtttagacgatgtactattcaaagtaggacttttt
acaaattttggagctagtcacctcgactatcatcagagcatggagcattactatgcatca
aaacgcaaattcttttcagaagttttagaaccaagtgctgtaggagtttttaattcagag
caaagttggtcaaatgatattttatcaatttgccgagatagacgcattaaatcagttcta
atcgggaaagacttacgggtagagcatagcgtggttaattctgaagggactgaattaact
attaactgcttcggggagaagaaaaatattcatatcccattcataagcacctttcaaact
gagaatatcctattttctatagggtctctaattggacttaataaggatataggattagtt
ctagatagtgtaagcaaactcaaatcagtggagggacgaatggaattagtttgcagcaag
aatggcgccccaatttttgttgattttgctcatcggcctgagacctttgaaaaaatattt
cagcctcttaaagagcaggggaaaaacattgttctcgtctttggatgcggcggggggggc
aataaagaatgtcgcaccttattaggtaaaatagcagctaaatacgcaactagagttata
gtgaccgatgataatgctcggaatgaggatccaaggcaaatacgaagaatgattctgcag
ggttgtcctaaagcaattgaaattccagatcgaagaaatgccatttataccgctttagag
gggctaacagaaaatgatgtttgcattgtagcaggaagaggttcagaagaaatccaggtc
attaaagggaaagaaatcgctttcaatgataaagcagaaattctaaaagcactttctact
atagattttactttaacgtcttag
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