Syntrophotalea acetylenica: A6070_12105
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Entry
A6070_12105 CDS
T04585
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pace
Syntrophotalea acetylenica
Pathway
pace03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pace00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6070_12105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pace03021
]
A6070_12105
03400 DNA repair and recombination proteins [BR:
pace03400
]
A6070_12105
Enzymes [BR:
pace01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6070_12105
Transcription machinery [BR:
pace03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6070_12105
DNA repair and recombination proteins [BR:
pace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6070_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
APG44782
UniProt:
A0A1L3GE11
LinkDB
All DBs
Position
complement(2606331..2610437)
Genome browser
AA seq
1368 aa
AA seq
DB search
MAYSIANNQLLRKHFNTIKGIIEIPNLIDIQKNSYKRFLQAGLPPSARKNIGLEAVFRSV
FPIRDFSETCSLDYVSYSLGTPKYDVNECHQRGMTYAAPVKVCVRLVSWDVDKESGVQAI
RDIKEQEVYFGEIPLMTENGTFIINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYNA
RVIPYRGSWLDFDFDHKDILYVRIDRRRKLPATVLLKALGYSAEELLNYYYQTETVVLDG
DSYKKRVNLELLSGQRASADIVGNDGEVIVRANRKFTKASIRKLADSNVEFIPVSSEEVV
GKVASTDIVDVATGEVVVECNEEISEAKLEELRSRGINEFSILFIDHLHVGPYLRETLLI
DRMATPEDARIEIYRRLRPGDPPTIKSANALFESLFFNPERYDLSVVGRIKLNYKLHLDA
PEEQTTLTKEDILEVVRYLVGLRDGRGNIDDIDHLGNRRVRAVGELLENQYRVGLVRMER
AIKERMSLQEVDSLMPHDLINSKPVSAVVKEFFGSSQLSQFMDQTNPLSEITHKRRLSAL
GPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLIASLSTYARINEHGFVETPYRV
VKDGKVTNEIRYFSALEEGGHAIAQANAPLDEEGRFVNELVNARQNGEFVLIQREEIGLM
DVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRSDAPLVGTGMERIVAHDSG
AAVVARHNGIVESVDASRIVVKLDEGEVDEDGTGVDIYNLIKFARSNQNTCLNQKPIVKV
GDRVSRGGIIADGPSTQWGELALGQNVLVAFMPWEGYNFEDSILISEKLVKEDRYTSIHI
EELECVARDTKLGKEEITNDIPNLGEDALKDLDESGIVRIGAEVKPGDILVGKITPKGET
QLSPEEKLLRAIFGEKAGDVRDTSLRLPPGVEGVVIGARVFSRKGADKDSRTEYIEKTEI
EKLLKDQHDEIRIIRESSRSNLESLLLGQVSATSLFDSAGKELLGQGEKITVEVLDGLPF
ARWREISLLDAPEKEEKLSSILASLAQREELIREVFADKIEKIKRGDDLPPGVIKMVKVY
IAIKRKLSVGDKMAGRHGNKGVLSRVLPEEDMPYMADGTPVEIVLNPLGVPSRMNVGQIL
ETHLGLAARGLGIQIQQHLDRHFSPDALRGKIADAYQDDRVTDLVNGLSDDEVVRLSRQL
ANGIPMASPVFEGVTEEQMKAQIERAGFASSGQMTLYNGKTGDPFKEKVTVGIMYMLKLH
HLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAHALQEFLTVKSD
DVTGRTRMYEAIVKGKHTLEAGLPESFNVLIKELQSLCLDVELLEEQE
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcttattcgattgcgaataaccagcttcttaggaaacattttaacacgatcaaaggc
atcatcgagatccccaatctcatcgatatccagaaaaattcctacaagcgtttcctgcaa
gcagggctccctccttctgctcggaaaaatatcgggcttgaagcggtttttcgctcggtt
ttccctattcgtgattttagcgaaacctgttctctggactacgtttcctattctctggga
actcccaagtacgatgtcaatgaatgccatcagcggggcatgacctacgccgctcccgtc
aaggtatgcgtgcgtcttgtttcatgggatgttgacaaggaatccggcgttcaggcgatt
cgcgatattaaagagcaagaagtttatttcggcgagatccctctgatgaccgagaatggt
acctttatcatcaatggtaccgaacgtgtcatcgttagtcagttgcaccgttctcccggt
gtattttttgaccacgataagggtaagacccactcgagtggcaaggttctttataatgcg
cgggtcattccatatcgtggctcgtggctggatttcgattttgaccataaggatatcctc
tacgtccgcatcgaccgcaggcggaaactgcccgccacggtgctactcaaggccctcggc
tatagcgctgaagagcttctgaattattattaccagacggaaacagtcgtccttgatggc
gattcctataaaaagagggtcaatctggaactgctgtccgggcagcgggcttccgccgat
attgttggaaacgacggggaagttattgtccgagccaaccggaaattcaccaaggcgtcc
atccgcaagcttgccgacagcaatgtggaattcataccggtttcctccgaggaggttgtt
ggtaaagttgcttcaacggacatcgttgatgttgccaccggcgaggtcgtggtcgagtgc
aacgaagagatctcggaagccaaactcgaagagttgcgttcgcgcggaattaacgagttc
agcatcctgttcatcgatcatttgcacgtcggtccttatctgcgggaaaccctgttgatc
gatcgcatggccactcccgaagatgcgcgcatcgaaatataccggcgcctgcgcccggga
gacccgccgaccatcaagagcgccaacgcgctgtttgaaagcctcttctttaatccggag
cgctatgatctgtccgtggtcggacgcatcaaactcaattacaagctgcacctggacgct
ccggaagaacagacaacgctgaccaaggaagatattctggaagtcgtgcgatatctggtt
ggcctgcgcgacggacggggcaacatcgacgatatcgatcaccttggcaatcggcgtgtg
cgggcggttggcgagttgctcgaaaaccagtatcgggtgggcctggtgcgcatggaacgc
gccatcaaggagcgcatgagcctgcaagaggtcgacagcctgatgccgcacgatctgatc
aactcaaagccggtttcagcagtggtcaaggagtttttcggctcttcgcagctgtcccag
ttcatggatcaaaccaatccgctttccgagattacccataaacggcgtctttcggccctg
ggacccgggggtctgactcgggagcgcgccggattcgaggtgcgcgacgtacatccgacc
cactatgggcgtgtctgcccgatcgaaacgccggaaggacccaacatcggcctgatcgct
tccttgtcgacctatgcgcgcatcaacgagcacgggtttgtcgagacgccctaccgggtc
gtgaaggacggaaaagtaaccaacgaaatccgctatttttccgcccttgaggaagggggc
catgccatagcccaggccaatgcgcctctcgatgaagagggccgctttgtcaatgagctt
gtcaacgcccggcaaaatggcgagtttgtgctcattcagcgcgaagagatcggccttatg
gacgtttctcccaagcagctcgtgtcggttgcggcatcgttgattccgtttctggaaaat
gacgacgccaaccgtgcgctgatggggtccaacatgcagcgccaggcggtgccgctgctt
cgttccgatgccccccttgtgggcacgggcatggagcggatcgtcgctcatgactcaggc
gccgctgtggtagcgcggcacaacggcatcgtggagtcggtagatgcttcccgtatcgtg
gtgaaacttgacgagggcgaggttgacgaagacggcaccggtgtcgatatttacaatctg
atcaaattcgcccggtcgaatcagaatacctgcctcaatcagaagccgatcgtcaaggtc
ggcgaccgtgtcagccgcggcgggatcatagccgacgggccctcgacgcaatggggggaa
ctggcattgggacagaatgtcctggtggcctttatgccctgggaaggttacaatttcgag
gactctatcctgatctccgagaaacttgtcaaggaggaccgttatacatcgatccatatc
gaggaactcgagtgtgtcgctcgggataccaagcttggcaaagaggaaataaccaacgac
attcccaatcttggcgaggacgcgctcaaggacctcgacgagagtggcatcgtgcgcatc
ggcgccgaagtcaagcccggtgacatcctggtcggcaagattaccccgaaaggcgaaact
cagctgtctccggaagagaaactgctgcgcgccattttcggcgagaaggctggtgacgtg
cgggatacgtccctgcgtctgcctcccggtgtggaaggtgttgtcatcggcgcgcgggtt
ttctcccgcaagggtgccgacaaggacagccgtaccgaatacatcgaaaagaccgagatc
gagaaattgctgaaggatcagcacgatgaaatccgcatcatccgggagtcgagccgcagc
aaccttgaatccctgctgctcggtcaggtgtcggcaacctcgctgtttgattccgccggc
aaggaacttctcggccagggcgagaaaatcactgtcgaggtactcgatggcttgccgttc
gcgcgatggcgggaaatcagtcttctcgatgcgcccgaaaaagaggaaaaactgagcagc
atcctggcaagtctggctcagagggaagaactgatccgggaggttttcgcggacaagatt
gaaaagatcaaacgcggggacgatcttcctcccggcgttatcaagatggtaaaggtgtat
attgccatcaagcgcaaactttccgtcggcgacaagatggccggacgccatggcaacaag
ggcgttctttcccgcgtgcttccagaagaagatatgccgtacatggccgatggcacgccg
gtcgaaatcgtactgaaccctctgggggtcccctcgcgcatgaacgtcggccagattctc
gagacgcacctcgggctggcggcaagaggtctggggattcagatccagcagcatcttgac
cgtcatttcagtcccgatgccctgcgcggcaagattgccgatgcctaccaggacgatcgg
gttaccgatctggtaaatggactgtcagacgatgaagtcgtgcggttgtcgcggcagttg
gccaatggtatccccatggcctctccggtattcgagggggtcacggaagagcagatgaag
gcccagatcgaacgtgccggatttgcttcttccgggcagatgaccctctataacgggaaa
accggggatcctttcaaggaaaaggttaccgtcggcatcatgtacatgctcaagctgcat
catctggtcgacgacaagatccatgcccgcagtatcggtccctacagtctggttactcag
cagccgcttgggggcaaggcgcagttcggcggacaacggcttggggagatggaggtatgg
gccatggaggcatatggcgccgcccatgctctgcaggagttcctgaccgtcaagtccgac
gatgtcaccggacgcacgcgaatgtacgaggccattgtcaagggtaagcatacccttgag
gccggccttcccgagtcgttcaacgtactgatcaaggaattgcaatctctttgtctggat
gttgagctccttgaggagcaggaataa
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integrated database retrieval system
