Paenibacillus sp. CAA11: DCC85_14945
Help
Entry
DCC85_14945 CDS
T10401
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pacl Paenibacillus sp. CAA11
Pathway
pacl00730
Thiamine metabolism
pacl01100
Metabolic pathways
pacl01240
Biosynthesis of cofactors
pacl04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pacl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DCC85_14945
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DCC85_14945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pacl03016
]
DCC85_14945
Enzymes [BR:
pacl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DCC85_14945
Transfer RNA biogenesis [BR:
pacl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DCC85_14945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
ThiI_fer
THUMP
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AWB45388
LinkDB
All DBs
Position
complement(3180948..3182189)
Genome browser
AA seq
413 aa
AA seq
DB search
MKPNYDMLLLRFGEISVKGKNRSKFEKAAITHVKSLLDSFPKAKVIKDYGRLYIELNGES
AEELIGQLKKVFGITSISPVLRTKSQLEDILTAATDFISKLQPAEGTRFKVNARRVWKEF
PYSSQEMNKQVADPILKACSALKVDVHHPQIELRVEVREQATYLYSEVIPAAGGYPFGSN
GKAMLLLSGGIDSPVAGWSAMRRGLEIECVHFHSYPFTSKQAEDKVIELAKILSGYSGSQ
IKLHLVPFTEVQTAFTKAGQDNLIITFMRRAMLRIATELAEKNKALAIVTGESLGQVASQ
TLSSMNVIGRATDLPLLRPLVMMDKEEIIQLSMKVGTYELSILPYEDCCTLFLPKSPTTN
PNLRVVEKVEATLEGLEELIQGAVDQTETLTIKADGTIFGRDAQTTTVPEKWF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctaattatgatatgctcctgctgcggttcggggagattagtgttaaaggaaag
aaccgctctaaatttgagaaagcagccatcacccatgtgaagagcctgctcgattcattt
ccaaaggctaaagttatcaaagattatggtcgtctgtatattgagttgaacggggaatca
gctgaagagttgatagggcagctcaagaaggtgtttggcatcacatctatcagccccgtt
ctacgcaccaaatcacagcttgaagatattttaactgcagcaacagactttattagtaag
ttgcagcctgctgaaggaacccggtttaaggttaatgcccgcagggtatggaaggagttt
ccttattcttcccaggagatgaataaacaggtggctgatccgatcctgaaggcttgctct
gctctcaaggtggatgtccatcatcctcaaattgagctgcgtgtagaggttcgcgaacaa
gcgacctacctgtacagtgaagtgatccccgctgcaggaggctatcctttcggttctaat
ggaaaggccatgctgttgttatccgggggcattgacagcccggttgccggctggtcggct
atgcgcaggggcctggaaattgagtgtgttcattttcacagttatccgttcacaagcaaa
caggcagaagacaaagtcattgagcttgctaaaatactatccggatactcaggaagtcag
attaagcttcatcttgttccgtttacagaagtgcaaacagcgtttaccaaggcgggacag
gacaatttgatcattaccttcatgcgccgggccatgctgcgaattgcaaccgagcttgcg
gagaagaataaggctctagctatcgtgaccggggagagcctgggacaggtagccagtcag
actttatccagcatgaatgtgattggcagggcgacagatcttccattgcttcgtccgctt
gttatgatggataaggaggagattattcagctgtctatgaaggtgggaacttatgagctg
tccattcttccttatgaggactgctgcacgctgtttctccccaaatctccaaccacgaac
ccgaatctgcgggtagttgagaaggttgaggccaccctggaagggctggaggaactaatt
caaggggctgtggatcagactgagacgttaacgatcaaagcagatgggacgatctttggc
agagacgcacaaactactactgtaccggagaaatggttctga
DBGET
integrated database retrieval system
