Pyxicephalus adspersus (African bullfrog): 140323611
Help
Entry
140323611 CDS
T11284
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
140323611 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pads03000
]
140323611 (IRF1)
Transcription factors [BR:
pads03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
140323611 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
SMP_MUG190-like
DUF668
Plasmodium_Vir
Motif
Other DBs
NCBI-GeneID:
140323611
NCBI-ProteinID:
XP_072256935
LinkDB
All DBs
Position
2:59330180..59337516
Genome browser
AA seq
355 aa
AA seq
DB search
MYRWSGVTGQKAHGTMERWVCYQGVSAQEEHGARRWGLQNVEAPSMGSVQMGRMPVTRLR
MRPWLEKQIESETIPGLSWVNKDELIFQIPWKHAARHGWDMDKDASLFRSWAIHTGRYKP
GEKEPDPKTWKANFRCAMNSLPDIKEVKDRSIYKGSSAVRVYKMLPAPIKTEKKERKSKA
QKDSKSRPQKKVDSMSADEVEEAVKNCQLPEDHCGYTVTDYSTHDATGNSDTGINQCEVT
SSIPAWNEQMPSPDSTNDHYHFQVSPMPSSSEGEDDMLSDEMLLAILDATPEWQHINVAS
KGYFTNEPGTAGTFVHSSSSGLDTLSMLEEIHVRVTTDLKPVDFPLQELTAITCL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtatagatggagtggggtcactgggcagaaagcacatgggacaatggagaggtgggtg
tgttatcagggggtctctgcacaggaagaacacggggcaaggagatgggggctacaaaac
gttgaggctccttcaatggggtctgtgcaaatgggcagaatgccagtcacacgtttaaga
atgagaccttggctcgagaagcagattgaatcagaaacaattccaggactttcatgggtt
aacaaggacgagttgatcttccagatcccatggaagcatgctgcacgtcatgggtgggac
atggacaaagatgcctctcttttccgcagctgggctatccacacaggaagatataaacct
ggtgagaaggaacctgatccaaagacatggaaagctaacttccgctgtgctatgaattct
cttcctgatattaaagaagtgaaggacaggagcatctacaaagggtctagtgctgtgcga
gtctacaaaatgctgccagctccaattaagacagagaagaaagagcgcaaatccaaggcc
cagaaagattccaagagtagaccccaaaaaaaggttgacagcatgtcagcagatgaggtg
gaagaagcagtgaaaaactgtcaattaccagaggatcactgtggttacacagtgactgat
tactcaacacatgacgctactggcaattcagatacaggcataaatcagtgtgaagtcacc
agcagcataccagcatggaatgaacaaatgccatcacctgacagcaccaatgaccattac
cacttccaagtgtcacccatgccatcaagctcagaaggtgaagatgatatgttatctgat
gagatgctgctagctattctggacgcaacgccagagtggcagcacataaatgtggccagc
aaaggatacttcaccaatgaaccaggaacagcaggcacttttgtacatagttcaagctcc
gggttggataccttaagtatgctagaagaaatacatgtccgagtcactacagatttgaaa
ccagttgacttcccattacaagaattaacagccatcacctgcttatga
DBGET
integrated database retrieval system
