Pyxicephalus adspersus (African bullfrog): 140334299
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Entry
140334299 CDS
T11284
Symbol
SMG8
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140334299 (SMG8)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
140334299 (SMG8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
140334299
NCBI-ProteinID:
XP_072272691
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Position
1:84672980..84680588
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AA seq
921 aa
AA seq
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MKVPSGGPSVLRELLSSEPAWKEDEVCVVGVFGKTALLQGGWDKGCLVNSLCDRHVFPLF
HRPPERARERSVFQTYYEQESRVLYVVLTGISDTAQLARVCEDLGRGFPHAESHELWKDE
EKLYCMHVLYLFCVCHLLLLVHPTCCFDIAYEKLFRALDSVRQKLLPTLKPALKECPVGL
DWKLNARPCPPRLLFVFQLNGALRGVEPSGRGGAQAVVDSKPKKHSPKRRLQHALEDQIY
RIFRKSRVLTNQSINCLFTVPANQAFVYIVADQDDDPIGMLLDGLRHHCTLKDTDSSGIT
APITGPRRYQMMRHSRQLSFTAESSSSVSGQLVDCTLREFLFQHVELVLTKKGFDDSVGR
NPQPSHFELPTYNKWANVALRVYEVIIENKDDDPPAFPGGYPPKLLANMKVLEGYLDADT
KFSENRCQKALPLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGPAFQKYAIHLNE
DCYKFWSSGHQLCEERSLTDQHCVHKFHLLPKAGEKIEPDRNPPILYHNSRARSTGNCNC
GRKQAPREDPFDIKSANYDFYQMLEEKCCGKLDHINFPIFQPSTPDPAPAKDETAFTSQD
GEVETEKLKDKEPQTQGESTSLSLALSLGQSTDSLGTYPAEPQAGGDNGDAPSHGAEDKG
EKRPSLVDRQASTVEYLPGMMHSNCPKGLLPKFSSWSLLKLGPAKSYNFHTGLDQLGFIP
GTNYLMPWDIVIRTKPEDEGDLDTNSWPAPNKSVPGKRSGVAMGRGRRRDDIARAFVGFE
YEDSRGRRFMCSGPDKIMKVLGNGPKESAVKALNSDMPLYMLSPSQGRGLKPHYAQLMRL
FVVVPDAPLQIIMTPQVQPGSPPCPTFFPEKQEITLPADGLWVLRLPYSYVTERGPCYPP
KENQQLINYKVMRGILKSIPL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgccatcgggtggcccgtctgtgctgcgggagctgctaagctcggagccggct
tggaaggaggacgaggtgtgtgtggtgggggtgttcgggaagacggcgcttctgcagggc
ggctgggacaagggctgtctggtgaactctctgtgtgaccgccatgtgttccccctcttt
caccggcctccggaacgggcccgggagcgcagtgtgttccagacatactacgagcaggag
tcccgggtgctgtacgtggtgctgaccggtatcagtgacacggcgcagctggcccgggtg
tgtgaggatttgggtcgcgggtttccccatgcagagtcccatgagttatggaaggatgag
gagaagctgtactgcatgcatgtcctctacctgttctgtgtgtgccacctgctgctcctg
gtacatcccacctgctgctttgacatcgcctatgagaaactcttccgggccctggacagc
gtccgccagaagctgctgcccaccctcaagccggcccttaaagaatgccccgtggggttg
gattggaagctgaatgcccgtccctgcccgccccggcttctattcgttttccagctaaat
ggagccctgcggggagtagagcccagcgggcgtggaggggcccaggcggttgtagacagt
aagcccaagaaacactcgcctaagaggaggctccagcatgccttggaggaccagatttac
cgcatcttccgcaagagccgcgtcctcaccaaccaaagcatcaattgcctgttcaccgta
cccgccaaccaggcctttgtttacattgtggctgaccaggatgacgatcccattgggatg
ttactggacgggctgaggcatcactgcaccttaaaagacacggattcctccggaataacc
gcaccaatcacagggcctcggcgctaccagatgatgagacatagccggcagctgtcattc
accgcagagagcagctccagtgtgtctgggcagctggtggactgcacacttagggagttc
ctcttccagcatgtggagctggtgctcaccaagaaaggctttgatgacagcgtgggccgg
aacccacagccctctcactttgagctaccaacctataacaaatgggctaatgtggccctg
agagtgtacgaagtcatcatagagaataaagatgatgatcctcctgcattcccaggcggc
tatcccccaaaactcctggccaacatgaaagtgcttgagggatatttagatgcggataca
aagttttcagaaaacaggtgccaaaaagctcttcccttggcacacagtgcttaccaatct
aatctgccacataactacaccacaacagtacataagaatcaactggcacaggccctaagg
gtatatagccagcatgcccgtggaccagcttttcagaagtatgctatacaccttaatgaa
gattgttataaattctggagtagtggccatcaactttgtgaagagagaagtttaacagat
cagcactgtgtccataagtttcacttgttgccaaaagcaggagagaaaattgaacctgat
agaaaccctcctatactgtatcacaatagtcgtgcaaggtcgactggaaactgtaactgt
ggaagaaaacaggcacctcgtgaagacccatttgacataaagagtgccaattatgatttc
tatcagatgctagaagagaagtgttgtggaaagctggatcacatcaacttccctatattc
caacctagcactcctgacccagcgccagcgaaggatgaaactgcatttacttcccaagac
ggtgaagtagaaacagaaaagctaaaagataaagaacctcaaacacaaggtgaaagtact
agcttaagtctggccctcagcctgggtcagtccactgatagtttgggtacatatccagct
gaacctcaagcaggaggagataatggagatgctccaagccatggtgcagaagataaaggg
gaaaagaggccaagtctagtggaccgtcaagcatccactgtagaatatcttcctggtatg
atgcattcaaattgtccaaaaggtctacttcctaaattttccagctggtctctattaaaa
ctcggtcctgcaaaatcatacaatttccacactgggttagatcaacttggttttattcct
ggaacaaattatttgatgccttgggacattgtaatccggacaaagcctgaagacgaaggg
gatttagatactaattcttggccggctccgaataagtctgtccctggaaaacgaagtgga
gtggcaatgggaagaggccgtagaagagatgatattgctagagcatttgtgggtttcgaa
tatgaggactctagaggccgcagatttatgtgttcaggccctgataaaataatgaaagta
ttaggcaatggacctaaagagtctgcagtcaaggcacttaacagtgatatgcctttgtat
atgttatcaccctcacaaggacgaggacttaaacctcattatgcacagctcatgagacta
tttgttgttgttcctgatgcacctttacaaattataatgactccccaggtgcagcctgga
tcacctccctgtcctaccttctttcctgaaaagcaggaaattacattaccagctgacgga
ttatgggttttgcgattgccttactcttatgtcacagaacgaggaccttgttaccctcca
aaggaaaaccagcagctgatcaattacaaagttatgagaggaatattaaaatctatcccc
ctgtaa
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