Pyxicephalus adspersus (African bullfrog): 140335824
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Entry
140335824 CDS
T11284
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04510
Focal adhesion
pads04512
ECM-receptor interaction
pads04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140335824 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140335824 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
140335824 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pads00535
]
140335824 (COL9A2)
Proteoglycans [BR:
pads00535
]
Extracellular matrix (ECM) proteoglycans
Others
140335824 (COL9A2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
140335824
NCBI-ProteinID:
XP_072274899
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Position
1:91141671..91189232
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AA seq
682 aa
AA seq
DB search
MASLQLSVILQLICLSLAQFRGPPGPAGPPGPPGPPGIPGSDGIDGDRGPPGIGPAGAKG
EPGPPGPDGPPGEAGIDGLIGAKGDPGPPGRPGPKGQSGLPGPPGKPGPGIAGLPGSPGQ
VGLPGEIGQTGIKGERGPVGPSGPPGPPGKPGPSGNIQGLEGSADFLCPTNCPAGPKGPQ
GLQGVKGHKGRPGPLGESGPQGKPGSKGDVGISGEQGIPGPPGPQGIRGYPGPGGPKGET
GPTGYKGMIGSVGAAGKPGEEGPKGPPGEPGEKGDKGARGVIGQMGAMGPKGSNGLPGID
GKDGTPGVNGVKGSTGQNGFPGSPGHQGLAGLPGQPGTKGGIGQKGEPGTRGEPGFVGAP
GKQGERGPPGEIGPRGIVGIKGDRGERGPVGPVGVEGKVGAKGEQGPPGIPGPQGIPGVK
GDKGFPGKVGGKGDVGDPGVEGLAGEKGEKGESGEPGPKGQQGVHGELGYTGPTGDPGQP
GVQGLGGLPGPRGLNGERGVPGMPGRPGVAGRDAGDQHIIDVVLKMLQEQLAEVAVSAKR
AALGGAGIMGPPGPPGPPGAPGEQGPHGHHGPRGIPGIVGVMGQIGNTGPKGRRGEKGDR
GDTGRGHQGLPGPPGIPGLPGIPGHAIDGKDGERGPEGVAGEPGRPGLPGPAGLPGFCEA
AACLAASAYAPASLTEPGTVKG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctacagctctctgtgatcctacagctcatctgcttgtccctggcacagttt
agaggtcctccaggtccagcagggcctcccggtccaccaggcccaccagggatcccagga
tcagatggcatagatggtgacagagggcctccaggaattggtcctgcgggtgcaaaagga
gaaccaggaccccctggaccagatggtcctcctggtgaagctggaattgatggattaata
ggagccaagggagatcctggacctcctggacgaccagggcccaaaggtcagtcaggactg
ccagggccaccaggaaaaccaggtcctggtattgctggacttcctggtagcccaggacaa
gttggacttcctggagaaattggacaaacaggaataaagggcgagagaggacccgttggg
ccttcaggaccaccaggaccaccaggaaaacctggcccctcagggaacatccaaggccta
gaaggcagtgctgatttcctgtgtccaacaaactgcccagcaggccccaaaggacctcaa
ggactgcagggagtaaagggccataaaggtcgtccaggtccccttggtgagtcaggacca
caaggcaaacctggctcaaagggagatgttggtatttcaggagaacaaggaattccagga
cctccgggccctcagggaatccgtggttacccagggcccggcggacccaaaggtgaaact
ggacccacaggatataaagggatgattggatcagttggtgcagcagggaaacctggtgag
gaggggccaaaagggcccccaggagaaccaggagagaaaggagataaaggtgcccgaggt
gtcattggacaaatgggagcaatgggtcctaagggaagcaatggtcttcctggtattgat
ggcaaagatggaactccaggggtgaatggagtaaagggcagcactgggcaaaatggcttc
cctggctcacctggtcatcaagggcttgctgggttacctggacaaccaggcaccaaagga
ggtattggtcaaaagggtgaaccaggtacacgtggggagccaggattcgttggtgctcca
ggaaaacagggagagaggggtccacctggagaaattggacctagaggtattgtaggtata
aaaggtgatcgtggtgaaagaggaccagttggaccagttggtgttgaaggaaaagtgggt
gcaaagggtgagcaaggacctcctggaatcccaggtccacaaggtattcctggagtaaaa
ggagacaagggtttcccaggaaaggttggaggaaagggtgatgttggtgaccctggtgtt
gaaggtttggcaggagagaagggagaaaagggggaatctggtgagccaggtcctaaaggc
cagcaaggtgtacatggtgaacttggatacactggcccaactggagatcctggccagcct
ggagtgcaaggtctaggaggactacctgggccgagaggtcttaatggagagaggggagtc
cctggaatgccaggaagaccaggagttgcaggcagagatgctggagatcaacacattatt
gatgtggttctaaaaatgttgcaagagcaactagcagaggtggctgtcagtgctaagaga
gctgccctaggaggagctggtatcatgggaccacctggacctcctggaccaccaggagcc
cctggagagcaaggaccccatggacatcatggaccacgtggtatccctggaattgtagga
gtaatgggtcagattggcaacacaggacccaaaggaagaagaggagaaaaaggagaccgc
ggtgacacaggacgtggtcatcagggtcttcctgggccccctggcattccaggtctccct
ggcattcctggtcatgctattgatggaaaagatggagaacgaggtccagagggagtagca
ggagagcctggcagacctgggttgcctggtccagcaggtcttccaggattttgtgaggca
gcagcatgtttggcagcatccgcatatgctccagcatctctgactgaacccggtacagtc
aaaggttaa
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