Pyxicephalus adspersus (African bullfrog): 140338537
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Entry
140338537 CDS
T11284
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140338537 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140338537 (CNOT1)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140338537 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140338537 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
140338537
NCBI-ProteinID:
XP_072278890
LinkDB
All DBs
Position
9:complement(385952..403167)
Genome browser
AA seq
2399 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQLEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECTSLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFVQLSKVLK
LSKVQEVIFGLALLNSCNSDLRAFAAQFVKQKLPDLLRSYVDVDVSGSQEGGFQDIAIEV
LHLLLSNLLFGQKGAFGVGQEQIVAFLTTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
SDSGGITKTMMDSSLADFMQEVGYTFCSSVEECRNIVVQFGVREVTAVQVARVLGMMART
HTGITDGISLQSITAPGSGIWSDGKDKNDGVQTHTWNVEVLIDVVKDLNPNLNFKEVTYE
LDHPGFLIRDNKGLQTVVYGIQRGLGMDVFPVDLIYRPWKHAEGQLSFIQHSLMNPDIFC
FADYPCHAVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSYPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQARLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFVQACMTFLKRRCPSILGGIAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSTSSLDAISPVQIDPLAAMASL
SIGGSAAPHTQSLPAFPPNLGSAFSTPQSPAKAFPPLTTPNQSTAFSGLGGLSSQLPGGL
GTGSLTGMGTGGLGLPAVNSDPFGQRKLSTSGLNQPTFQQTDLSQVWPEANQHFTKEIDD
EANSYFQRIYNQPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQYP
DKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYGSKMYFFGIAALDRFKNRLK
DYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALSQAQAQAQA
QVPAKAPLPGPVSTNAVTTSTATTSAKTVTITRPTGVSFKKDVPPSINTTNIDTLLVATD
QTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKDEFMPWVSQYLVMKRVSIEL
NFHSLYSNFLDALKNIEFNKMVLAETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMIT
LAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTMAIM
NVLAELHQEHDLKLNLKFEIEVLCKNLAIDINDLKPGSLLKDKDRLKSLDEQLSAPKKDV
KQPEELPNIPSANEYAIRTAGKLWASVEKQESDAVFTATATVPPPSTTSTVTVPPQPQYS
YHDIHVYSLAGIAPHITLNPTIPLFQTHPHLKQYVRQAIERAVQELVHPVVDRSIKIAMT
TCEQIVRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKTSFATSLR
AASPQQREMMEQAAAQVAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGR
RYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQP
MKQQAWATDDVAQIYDKCIAELEQHLHTIPPTLAMNPQAQALRGLLEAVALARNTRDAIA
ALGLLQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDSRAYGSPWCNKQITRCLIEC
RDEYKYNVEAVELLIRNHLVNMQQYDVHLAQSMENGLNYMAVAFAMQLVKILLVDERSVS
HVTEAEFFHTIETLMRINAHSRGNAPEGLPQLMDVLRSNFEAMIERAQGGPNFMMHSGIS
QASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITR
FFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTV
TKINLLNKVLGIVVGVLLQDHEVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLT
AFCNTFHILRPTKAAGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAP
FLRNVELAKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFP
RNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSELR
SNLQVSNEPGNRYSIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVD
LDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRP
HPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGSGAS
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctttcgctggctttgtctcaaatcagctaccttgtggacaaccta
accaagaaaaactaccgagccagccagctggaaatacaacacattgtcaatcggcacggc
cccgaggcagacagacacttactacgctgcctcttctcacacgtggatttcagtggcgat
ggtaaaagcagcgggaaagatttccaccagacccagtttctgattcaggagtgcacatcg
ctgatcaccaagcctaacttcatctccaccctctcctacgccatcgacaatccattgcac
tatcagaagagtctgaagccgtctccccatctttttgtccagctgagcaaagttcttaag
ctcagcaaagttcaggaggtgatctttggcttggcccttctgaactcctgcaacagtgac
cttcgggcctttgctgcacagtttgtgaagcagaagctccctgatctcttgcgttcctac
gtagacgtggacgtaagtggcagccaagaaggtggattccaggatatcgccatagaggtc
ctgcacctcctgctctccaatctcctttttggacagaaaggagcctttggggttggacag
gagcagattgtggcatttctcacaaccctgcgcagagattttccccaggagcgctgtcca
gtggtgcttgcaccacttctctaccctgaaaaacgggacatcctaatggaccggatttta
tctgattccggtgggataaccaagaccatgatggacagttccttggcagacttcatgcag
gaagtgggctataccttctgctccagtgtggaagaatgtcggaatatcgttgttcagttc
ggtgtccgggaagtgactgcggtgcaagttgctcgggtcctggggatgatggctcggaca
cacactgggatcacagatggcatctccctacagtcgatcaccgcccctggcagtggcatc
tggagcgatggcaaggacaagaatgatggcgtgcagactcacacttggaacgtggaggtt
ctcattgatgtagtaaaagacctgaatcctaatctaaacttcaaggaagtgacctacgag
ctggaccatcccgggttcttgatccgtgacaacaaggggcttcagacggtggtgtacggt
attcagagggggcttggcatggatgttttcccagtggatctcatctatagaccttggaaa
catgcagagggacagctctcctttatccagcattccttgatgaacccggatatcttctgc
tttgctgactatccctgccatgctgtggcaactgacatcctaaaggctcccccagaagat
gacaaccgggagatagctacctggaaaagtttggatctgattgagtcacttttacggctg
gctgaggtgggacagtatgagcaagttaaacagctcttcagctaccccatcaaacactgt
cctgacatgctggtcctggctctgcttcaaatcaatacttcctggcataccttaaggcat
gagctcatatccaccttgatgccaatttttctaggtaaccatcccaactctgccatcatt
ttgcactatgcatggcacggccagggccaatctccctccatccgccaactgatcatgcac
gccatggctgagtggtatatgcgtggtgagcaatatgaccaagcccgcctgtctcgtata
cttgatgtggcccaggacttgaaggccttgtcgatgctgctgaatggtactccatttgcc
tttgttattgatcttgctgcacttgcttcacgccgggaatacctcaaactggacaaatgg
ctgacggataaaatacgggaacatggggaaccctttgttcaagcctgcatgacgtttctc
aaacggcgctgcccttccatactgggtggcatagctccagagaaagatcagcccaaaagc
gcccaacttcctcctgaaactctggccacaatgctggcatgccttcaggcttgtgcaggg
agtgtgtcccaggagctctcggaaaccatccttaccatggtggcaaactgtagcaatgtg
gtaaataaggcgcgtcagcctcctccaggagttatgccaaagggtcgtcctcctagtacg
agcagtctggacgccatctctccggtacagatcgaccctctggctgcaatggcctctctc
agcattggtggttctgctgctcctcacacacagagccttccagctttccctcccaacctg
ggctcagcattcagcacgcctcagtcaccggccaaggctttcccccctctcacaactcca
aatcaatctactgcttttagtggccttggtggactttcctcgcagctgccaggtggactt
gggacaggcagtctaactggaatgggcactggaggactgggccttcctgctgtcaacagt
gacccgtttggacagaggaaacttagcacatctgggctcaatcagccaacattccagcag
acggacctctctcaggtatggccagaagcaaatcagcactttactaaagaaattgatgat
gaagccaacagctacttccaacgcatctacaaccagcccccgcaccccacaatgtctgtg
gatgaggtcttggaaatgctgcaaaggtttaaagactccaacataaagcgggaacgcgaa
gtctttaactgcatgctgcgcaatttgtttgaagagtatcgcttcttccctcagtaccca
gacaaagagttgcatattaccgcttgcttgtttggtggcatcattgagaagggactggtc
acatacatggccctaggactagcactgcgctatgtactggaagcattgcgcaaaccttac
ggatccaaaatgtatttctttggcatagctgcactagataggttcaaaaacaggttgaag
gattatcctcagtactgtcagcacttggcttccataagtcactttattcagtttcctcat
cacttgcaggagtatatagagtatggtcagcagtctcgggaccccccagtcaagatgcag
ggatcgatcaccaccccaggcagtattgcactttcacaggcccaggctcaggcacaagcc
caggtccctgccaaagctcctcttcccggccctgtaagcaccaatgcagttaccacatct
accgctacaacctcagccaaaacagtcaccataaccaggcccaccggagtcagcttcaag
aaggatgtaccgccgtccatcaacactaccaacatagacacactgctagtggctactgac
cagaccgagagaattgtggagccaccagagaatgtgcaagagaagattgccttcatattc
aataacctttcacagtccaacatgacacagaaggtggaggagctgaaggaaaccgtgaaa
gatgagtttatgccttgggtgtcccagtacttggtgatgaagagggtgagcattgaactg
aactttcacagtttatactccaacttcctggacgctctgaagaatatcgaattcaacaag
atggttctagcagagacttacaggaacatcaaggtgttgttgacatctgacaaagctgct
gctaacttctctgaccgctctcttctgaagaacctcggtcattggttgggcatgatcacc
ctggccaaaaacaaacccatcttgcacacggacctggatgtgaagtcgctgctgctggag
gcttatgtgaagggacagcaggagctgctttatgtggtgccttttgttgctaaagtcctg
gagtccagcgtcaggagtgtggtttttcgacctccaaatccatggacaatggcgattatg
aatgtccttgcagagcttcaccaagagcatgatttgaagcttaatttaaagtttgagatc
gaggttttgtgtaaaaatctggccattgacattaatgacttgaagcccggaagcctcctt
aaagacaaagatcgtctaaagtctctagatgagcagctttctgccccaaagaaagatgtc
aaacagccagaggagctgcctaatattcccagtgccaacgagtatgccatccgcacagca
ggcaagctctgggcttcggttgagaaacaggagtctgacgcagtcttcacagctacagcc
acagtcccacctcccagcaccacctccactgtaactgttccaccacagccgcagtacagc
taccatgatatccacgtctattcccttgctgggatcgcacctcacatcacgctcaaccca
acaatccctctcttccaaactcacccccacctaaagcaatatgtgcggcaggccatcgaa
cgggctgtgcaggagctggtacatcctgtggttgaccgttccatcaagatcgcaatgacc
acttgtgagcagatagtacggaaggactttgcattggattcggaggaatctcgaatgcgc
gtggctgctcatcatatgatgcgcaatctgactgctggcatggccatgataacatgcagg
gagcctctgctaatgagcatcgctaccaacttgaagaccagctttgccacatctctacgg
gctgcttcccctcagcaacgggagatgatggagcaggctgctgctcaagtggctcaggat
aactgtgagctggcttgctgctttatacaaaagactgcggtagagaaggctggaccagaa
atggacaagaggctggccacggaatttgaattacggaagcatgccaggcaggaggggcgg
cgctattgtgaccccgttgtactgacataccaggcggagaggatgccggagcagattcga
ctaaaggtcggtggtgtggaccccaaacagctggctgtttatgaggaatttgcacgaaat
gttcctggcttccttcctaccaatgatttgactcaacccacaggatttttggctcagccc
atgaagcaacaagcctgggccacagatgacgtagcacagatttatgacaagtgtatcgct
gaactagaacaacatctgcataccatcccacccacgctcgccatgaaccctcaagctcag
gctctacgaggtttgctggaagccgttgcactggctcgtaacaccagggatgccattgct
gctctggggctgctacagaaggctgtggaaggtctgctggatgctactagtggagctgat
gccgatctcctgcttagataccgggaatgtcatctactagtcctgaaagccctgcaagac
agccgggcgtatggttctccatggtgcaacaagcaaattaccaggtgtcttattgagtgc
cgggatgagtacaagtacaatgtggaggctgtggaacttcttatcagaaaccatcttgtg
aatatgcaacagtatgatgtccacctggctcagtctatggagaatgggctgaactatatg
gctgtggcctttgctatgcagcttgtcaagatcttgctggtggatgagcgcagcgtgagt
catgtgacagaggcagagtttttccacaccattgagactctgatgcgcatcaatgcacac
tcgaggggcaatgccccagaagggcttccacagctgatggacgtgcttcgttctaatttt
gaagccatgattgaacgagcccagggtggtccaaacttcatgatgcattcggggatatcc
caagcatcagagtatgatgaccctccaggacttcgcgagaaagcggagtacctcttgaga
gaatgggtcaatctgtaccactccgccgccgctggacgggacagcaccaaggctttctct
gcatttgttgggcagatgcaccagcaaggcattctgaagacggatgacctcatcaccaga
ttcttccgcttgtgtacagagatgtgcgtggaaataagctaccgcgctcaggctgaacag
cagcacaatccagctgccaaccccaccatgatccgagcaaagtgctaccataacctggac
gcctttgtcaggctgatcgcactgttagtgaagcactctggagaggccaccaatacggtg
acaaagatcaatctcctcaacaaagttcttggcattgtagtcggagttttgctccaggat
catgaggtgagacagagcgagttccagcagcttccataccatcgcatcttcattatgctt
ctgctggagctgaatgccccggaacatgtgctagaaaccatcaacttccagaccctcact
gccttctgcaataccttccatatccttcggcccaccaaagcagccggttttgtctatgcc
tggctggagctcatttctcaccgtatctttattgcacggatgttggcgcacactccccag
cagaagggttggccgatgtatgcccagctactgatcgacctctttaaatatctggcccca
ttccttcgaaatgtggagctcgccaaacctatgcaaatcctctacaagggcactctgcgt
gtactgctggttctgctccatgactttccggagttcctttgtgattatcactatggcttc
tgcgatgtcattccacccaactgcatccagctgaggaatctgatcctgagtgcctttccc
cgaaacatgagacttccggaccccttcacccctaacctcaaggtggacatgttgagtgaa
attaatattgcacccagaatcctcaccaacttcactggagtgatgccgccacagttcaaa
aaagacctggactcctacctaaagactcgctcgcccgtgactttcctctcagagctgcgg
agtaatctgcaggtatctaatgaaccaggaaaccgttacagcatccagctgatcaatgcg
ttagtcctttatgttggcacgcaggccatcgcgcacatccacaacaaaggcagcacccct
tccatgagcaccatcacccactctgcccacatggacatcttccagaacctggcagtggac
ctggacactgaagggcgctacctctttctgaatgccatcgccaaccagctgcggtacccc
aacagccacacgcactacttcagctgcaccatgctgtacctctttgctgaggccaacact
gaggccatccaggaacagatcactcgagttctattggagcgactgattgtgaacaggcca
catccttggggtcttctcatcacttttattgagctgataaaaaatcctgctttcaaattc
tggaatcacgaatttgtgcactgcgctccggagattgagaagttgttccagtcggtggct
cagtgctgtatggggcagaagcaagctcagcaagtgatggaaggttccggcgccagctag
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integrated database retrieval system
