Pyxicephalus adspersus (African bullfrog): 140340638
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Entry
140340638 CDS
T11284
Symbol
EXOSC10
Name
(RefSeq) exosome complex component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140340638 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140340638 (EXOSC10)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
140340638 (EXOSC10)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
140340638
NCBI-ProteinID:
XP_072282056
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Position
11:complement(55954266..55972086)
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AA seq
877 aa
AA seq
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MAAPVDGVTRNMEEKAEAIPGFPDTDSFVKFALGTVVSSTKSSTGLPQCGDEYDFYRSFP
GFRSFCDTQGDRLLHCMSRIMQYHGCRSHIRDRSKSGALEDKFDMLVDANDAVLERVGTL
LDEASGVNRSQQPILPAGIQPPKTVISSWNRKSSDTNKKGKTQTFRLLQAKNILRPQLKF
KEKIDNSNTPFVPKIFIKPNAQKPLPEILRNKREREQRPEDLDVPAALADFIHQQRLKQT
EDDMMAHPYQYELDHFTPLESSMEKPDIKPFVSLNEVPCHFVTTLDDLVQLNEKLLKCSE
FALDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDLYILNESFTDPAIVKVLHGAD
SDVEWLQKDFGLYIVNMFDTHQASRLLNLARNSLDHLLKHYCSVETDKKFQLADWRIRPL
PEEMIEYARADTHYLLYIYDRVRTDLLNGANGKQNLLQLVWQRSKDICLKKFVKPIFTED
SYMDLYQKQKKHLTTQQLTAFRLLYAWRDKMAREEDESTGYVLPNHMMLKICEELPKEPQ
GIIACCNPVPPLVRQQINELIQLIQQAREVPLQKSEMSTIKKKGPMPNFEKVENQLFGPH
DKTYSLFALDPYTGTVVPEAASTLFNDEEPAPARPHSPVPLLAYSTISIFNDLNEIMDNV
SSISLSKQKARSITETFDNPFRMFLPSDIRGAHASQAAKLDPNTKMFEISNRWKLVSMAQ
QEREAKAKEEAKQKKVAEKAAREKAKQEFKNNAANQTTVREQAAEEASKKRERVASESGA
ETKKSDKKKMKHTEKAVEESAVAKAPLTPFDYSKSNFKVFAGSSNVKTQSEFDPNKQAQS
GKQKKAGGKKHQSMGSKSMSFMGGKSDRGFKHSWPKR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcctgtggatggcgtgacgaggaacatggaggagaaggcagaggcgatcccg
gggtttcccgacactgacagcttcgttaagtttgccctgggaacagtcgtctcttccaca
aagtcatctaccggtctgccgcagtgtggagacgaatatgacttctatcgcagctttccc
ggatttcgttctttctgtgatacacaaggtgaccgactgctgcactgtatgagtcggatt
atgcagtatcatggctgccgcagtcacatccgggatcgtagtaagtccggtgccctggaa
gacaagttcgatatgctggtggatgctaatgacgctgtcctggaaagagtgggcacattg
ttggatgaagcctcaggagtgaaccgtagccagcagcccattctaccagcaggtattcag
ccaccaaagaccgttatctctagctggaaccgcaagagcagtgacacgaacaaaaaaggc
aaaacgcagacattccgtctgcttcaagccaagaacattctgcggccacagctgaagttc
aaagagaagatcgacaactccaacacacctttcgttccgaaaatatttatcaagcccaat
gctcagaagccacttccagagattctcaggaataaacgggagagagaacagcgccctgaa
gaccttgacgtccctgcggcactggcagattttattcaccaacagagattaaagcagact
gaagatgacatgatggctcacccttatcagtatgaattggatcactttactcccctggag
agctccatggaaaagccagacataaagccttttgtatctctgaatgaagtcccctgtcat
ttcgtaactacgttggatgatcttgtacagctaaatgagaagctgttaaaatgctcagag
tttgctttggatcttgagcaccattcatacagaagcttcctgggcctcacctgcctcatg
cagatctccacccgtactgaagattttatcatcgataccttggagttacgcagtgacctc
tacatcctcaacgagtctttcacagatcccgccattgtcaaggtgttgcatggagccgat
tcagacgtcgagtggctacagaaagatttcggcttgtacatcgtaaacatgttcgacacc
caccaagcttctcgattgctgaaccttgcaagaaattctctagatcacctcctcaaacat
tactgcagcgtagagactgacaaaaagttccaactcgctgactggagaatccgtccatta
ccagaggagatgattgagtatgccagggcggacacgcactacctgctctacatctacgac
cgcgtgaggacagaccttttgaatggcgccaatggcaaacaaaatcttcttcagctggtc
tggcagaggagcaaggatatctgtctaaagaaatttgtgaagccaattttcacagaggat
tcatatatggacctgtatcaaaagcagaagaagcacctcaccacccagcagctcacagcc
ttccgtctcctgtatgcatggagagacaagatggcgcgggaggaagatgaaagtacaggg
tatgtcttgcccaatcacatgatgctgaagatctgcgaggagcttcctaaggagccccag
ggcatcattgcctgctgtaacccagtgccaccccttgtgagacaacagattaatgaatta
atacagctcatccaacaagccagagaggtcccactgcaaaagtctgaaatgagcacaata
aagaagaaaggtcccatgcccaattttgagaaagttgagaaccagctattcgggccacat
gataaaacctattctctatttgcactagacccctacactggaacagttgtaccagaagca
gctagcaccctgttcaatgatgaggagccagccccagcaagaccacacagccctgtccca
ttactggcatactccactatctctatattcaatgatctcaatgaaataatggataatgta
agcagcatctccctatccaagcagaaggccagaagtataacggagacctttgacaatcct
ttccgtatgtttcttccatctgatattcgtggtgcccatgcttctcaggcggctaagctt
gatcctaacacaaaaatgtttgagataagtaaccgctggaagcttgtaagtatggctcag
caagagcgtgaagcaaaggccaaggaagaggccaaacagaagaaagtggcagagaaagct
gccagggagaaagctaagcaggagtttaagaacaatgctgccaatcagacaactgtgcgt
gaacaggcagcggaggaagcaagcaaaaagcgtgagagagtggccagcgagtcaggggct
gagactaagaaatctgacaagaaaaagatgaaacacacagagaaggcagtggaggaatct
gcagtagcaaaggctcccctcactccctttgactacagcaagtcaaatttcaaggtgttt
gcaggcagcagcaatgtgaaaactcagtctgagtttgaccccaataagcaagcacagtca
ggaaaacagaagaaagctgggggcaagaaacatcagtcaatggggagcaagagcatgtcc
ttcatgggagggaaatccgatcggggcttcaaacacagctggccaaaaagatga
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