Pyxicephalus adspersus (African bullfrog): 140342611
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Entry
140342611 CDS
T11284
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads02010
ABC transporters
pads04146
Peroxisome
pads04977
Vitamin digestion and absorption
pads04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
140342611 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
140342611 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
140342611 (ABCD4)
04980 Cobalamin transport and metabolism
140342611 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pads04131
]
140342611 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pads02000
]
140342611 (ABCD4)
Enzymes [BR:
pads01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
140342611 (ABCD4)
Membrane trafficking [BR:
pads04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
140342611 (ABCD4)
Transporters [BR:
pads02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
140342611 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_29
FtsK_SpoIIIE
DEAD
RsgA_GTPase
AAA_23
AAA_22
nSTAND3
NACHT
T2SSE
nSTAND1
AAA_15
Motif
Other DBs
NCBI-GeneID:
140342611
NCBI-ProteinID:
XP_072284959
LinkDB
All DBs
Position
12:49305456..49324658
Genome browser
AA seq
627 aa
AA seq
DB search
MAVIYRAATLPDPGLHSKCPLYPPMGMRGVRANRGEKPRLDRVFIRRFFALQAILFPRWT
AQNTLMLMTLLTVALTGQLVIYQIGILPSQFYGVLSDRDLSGFRRLAVLSAALIVIISML
RSAEQYISKLVYVNCRKVMTQYLHQIYFTRQVYYTMSVEHSHVDNPDQRMTQDVERLCRE
LTSFASKILTTPFTLVYYSYQCAISTGWMGPVSIFGYFVIGSLLNKLLMGPVIPKLVEQE
KLEGDFRFKHVQIRVNAEAAAFTRAGSVEYARTERRLKCLIATQKDLMYQELWLSFGTNT
FDYLGGILSYMIIAIPIFSGVYNDLSAGELSELISKNAFVSIYLVSCFSQIIDLSSNLCD
VAGYTHRIGELVEVMIKILQEYKGSSPDEEEEEDKSSPEKSQLGDAVFIVDDVTITAPGS
ECTLVRDLSLHISEGSNLLISGETGSGKSSILRVLAGLWKIKHGRVSVFTQFGPHGVLFL
PQKLFLSDGSLREQVIYPLKEIYPSSGRMDDERILRSLDMSGLTSLVSRTGGLDHAVDWN
WSEVLSPGEIQRLAFSRLFYLQPKYAVLDEASSALSEEAEAELYSQCTQLGMTLISVGHR
RSLQEFHHLELRIGPGGQWELRRLKKS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgatatacagagcggcgacacttccggatccgggtttacacagtaagtgtccc
ttgtacccgccgatgggaatgagaggtgtgagggccaaccgaggagaaaagcctcgtctg
gaccgggtcttcattcgcaggttttttgctctgcaggctattctcttcccacgatggaca
gctcagaatacactgatgttgatgacattgctgacagttgccctgacaggacagctggtc
atttaccagattggtattctgcccagtcagttctatggtgttctgtctgatcgagacctt
tccggatttaggaggctggcagtactgtctgcagctctgatcgtcatcatttctatgctg
cgcagcgcagagcagtacattagtaagctggtctatgtgaactgtcggaaggtgatgaca
caatatctgcaccaaatttacttcaccagacaagtctactacacgatgagtgtggagcac
agccatgtagataacccagatcagagaatgacacaggatgtggagcgtctgtgccgagaa
ctcaccagtttcgctagtaaaattcttactacacccttcacacttgtctattactcctat
cagtgtgccatcagtacgggctggatgggtcctgtgtccatctttggatattttgttatc
ggatctctgctgaataaacttctaatgggtccagttatcccaaaactagttgagcaggag
aagttggagggtgactttcgtttcaaacatgtacagatccgcgtcaatgctgaagccgca
gctttcacaagagctggctctgtggaatacgcaagaacagagcgccgtctgaagtgcctc
attgcaacgcagaaagatctgatgtaccaggaactttggctgtcttttggaacaaacact
tttgattatctgggtggaattctgagttatatgattatcgctattcccatcttctctgga
gtgtacaatgacctgagtgctggcgaactaagtgaactcatcagcaagaatgcatttgtt
tccatctacctggttagctgcttcagtcagatcattgatttatccagcaatctgtgtgac
gtggctgggtatacacatcggattggggagctggtggaggtgatgataaagattttacag
gaatacaagggttcaagtccagatgaagaagaagaagaagataagtcctctccagagaag
tcacagcttggggatgctgtatttattgtggatgatgtaacaataactgctccaggatct
gagtgcacattggtgcgagatctcagtctacatataagtgaggggagcaatctcctgata
agtggagaaactggcagtggaaaatcttccattttgcgtgttctagcaggactgtggaag
atcaaacatggtcgggtctctgtcttcactcagtttggtcctcatggtgttcttttcctg
ccacaaaagctatttctgagtgatggaagcctgagagagcaggtcatctacccactgaag
gaaatatacccaagttcaggtcggatggatgatgagagaatcctcagatcactggatatg
tcaggcctgacatctctggttagcaggacagggggtctggaccacgcagtggactggaac
tggtcagaggttctgtctcctggagaaattcagcgtttggccttttctcgccttttctat
ctgcaacctaaatatgcagtgctggatgaggcaagcagtgcactcagcgaggaagcagag
gcagagttatattcacagtgtacccagctaggaatgacattgattagcgttggacacaga
cgcagcttgcaggagtttcatcatctggaactcagaattggtcctggtggacagtgggag
ctgcgacgcctaaagaaatcatga
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