Pseudohalocynthiibacter aestuariivivens: G5B38_14415
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Entry
G5B38_14415 CDS
T06463
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed02024
Quorum sensing
paed03060
Protein export
paed03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
G5B38_14415 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
G5B38_14415 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5B38_14415 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paed02044
]
G5B38_14415 (ffh)
Enzymes [BR:
paed01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
G5B38_14415 (ffh)
Secretion system [BR:
paed02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
G5B38_14415 (ffh)
Eukaryotic Sec-SRP protein
G5B38_14415 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_16
AAA_33
AAA_31
AAA_22
AAA_30
ResIII
AAA_18
NACHT
ArsA_ATPase
APS_kinase
Thymidylate_kin
AAA_14
AAA_5
YqeC
AAA_7
ABC_tran
DO-GTPase1
KTI12
6PF2K
TetR_C_7
Motif
Other DBs
NCBI-ProteinID:
QIE46619
LinkDB
All DBs
Position
complement(3002081..3003592)
Genome browser
AA seq
503 aa
AA seq
DB search
MFENLSERLSGVFDRLTKQGALSEDDVKTALREVRVALLEADVSLPVARDFVKHVQEQAT
GQAVTKSITPGQQVVKIVHDTLVQTLTGEGDPGALKIDNAPAPILMVGLQGSGKTTTTAK
LAKRLKEREGKRVLMASLDVNRPAAMEQLAILGTQIGVDTLPIVKGEDPVQIAKRAKTQA
SLGGYDVYMLDTAGRLHIDADLIAQAAAVRDVANPRETLLVVDGLTGQDAVNVATEFDDK
IGVTGVVLTRMDGDGRGGAALSMRAVTGKPIRFVGLGEKMDAIETFEPERIAGRILGMGD
IVSLVEKAQETIEAEQAERMMRRFQKGQFNMNDLRMQLEQMQKMGGMEGVMGMMPGMGKM
AKQVQEAGFDDKILIRQIALIQSMTKKERANPKLLQASRKKRIARGSGQDVSELNKLLKM
HRQMGDMMKKMGKMGKGGMLKQAMKGMFGKGGPSPEEMAAGMDPKALEQAAKQMGKGMPG
GGLPGLGGGMGLPPGLSGFGKKK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctgtccgaacgcctctctggcgtctttgatcgcctgaccaaacagggc
gcgctgtccgaggacgacgtgaaaaccgccctgcgcgaggtccgcgttgccctgctggag
gccgacgtatcactgcccgtcgcccgcgatttcgtgaaacacgtgcaggaacaggccacc
gggcaggcggtgaccaaatccatcacccccggccaacaggtcgtcaaaatcgtgcacgac
acgctggttcagaccctcaccggcgagggcgatcccggcgctctgaaaatcgacaacgcg
cccgccccgatcctgatggtcggcctgcaaggctcgggtaaaactaccaccactgccaag
ctggcaaaacgcctgaaggaacgcgagggcaagcgcgtgctgatggcctcgctcgacgtg
aaccgccctgccgcgatggaacagcttgccattctcggcacccagatcggcgtcgacacc
ctgccaatcgtcaagggcgaagaccccgtccagatcgccaaacgcgccaagactcaggcc
agcctcggtggctatgacgtctacatgctcgacaccgcgggccgcctgcatatcgacgca
gatctgatcgcacaggccgccgccgtgcgcgacgtcgccaacccgcgcgaaacgctgctg
gtggtcgatggcctcacaggccaggacgccgtcaacgttgcgacagaatttgacgacaag
atcggcgtgaccggtgtcgtgctgacccgcatggacggcgacgggcgcggtggcgcggcc
ctctcgatgcgcgccgttaccggcaagccgatccgctttgtcggtctcggcgaaaaaatg
gacgcgatcgagacgttcgaacccgaacgcatcgcaggccgcatccttggcatgggcgac
attgtcagccttgtcgagaaagcgcaggaaaccatcgaggccgaacaggccgaacgcatg
atgcgccgcttccagaagggtcagttcaacatgaacgacctgcggatgcagctggagcag
atgcaaaagatgggcggcatggaaggcgtgatgggcatgatgcccggcatgggcaaaatg
gccaaacaggtgcaggaggctgggttcgacgacaagatcctgatccgtcagatcgccttg
atccagtcgatgacgaaaaaagaacgcgccaatcccaaactgctgcaagccagccgcaag
aagcgcatcgcccgcggctccggtcaggatgtctctgagctgaacaagctgctcaagatg
caccgccagatgggcgacatgatgaagaagatggggaaaatgggcaaaggcggcatgctc
aaacaggcgatgaaaggcatgttcggcaaaggtggccccagccccgaagaaatggccgct
ggaatggaccccaaggcactggaacaagccgccaagcagatgggcaaaggcatgcccggt
ggcggcctgcccggtctcggcggcggcatgggcctgccccccggcctgtccggctttggc
aagaaaaaatga
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