Paenibacillus sp. FSL H7-0737: H70737_18565
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Entry
H70737_18565 CDS
T03359
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
paej
Paenibacillus sp. FSL H7-0737
Pathway
paej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H70737_18565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paej03019
]
H70737_18565
03016 Transfer RNA biogenesis [BR:
paej03016
]
H70737_18565
Enzymes [BR:
paej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H70737_18565
Messenger RNA biogenesis [BR:
paej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H70737_18565
Transfer RNA biogenesis [BR:
paej03016
]
Prokaryotic type
tRNA degradation factors
H70737_18565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AIQ24672
UniProt:
A0A089IMJ8
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All DBs
Position
complement(4138402..4140504)
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AA seq
700 aa
AA seq
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MEKRVEMQLGGRRLVLETGRLAKQANAAVMVRYGDTSVLCTVTASKEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNMVMSVDQD
CAPDIAAMIGTSAALSISDVPFDGPIGGVAVGRINGEFVINPDMAQQAISDIYVVVAGTK
EAIMMVEAEANEVTEDVMLEAIMFGHDEIRKIVATIEELVKVAGKEKMAVKLHAVNADVN
TEVRAFAEARLVEAVKIAEKHARQEAIDVVNDEAVAYFVEKYIEAPELLKDVKEVLHDIV
KDEVRRLITHDKVRPDGRKLDEIRPIECDTSLLPRTHGSGLFTRGQTQILSVCTLGALGD
VQILDGIDPTETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETEF
PYTIRLVSEAIESNGSTSQASICASILAMMDAGVPIKAPVAGVAMGLIKDGDHVSILTDI
QGMEDHLGDMDFKVAGTAEGVTAIQMDIKIAGIDRNILQDALQQAKEGRLFILDKMNEAI
SAPRPNLSKYAPKIIIININPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIGSSD
EEMIQKARSIIEGLVREVQVGEIYVGTVRRIEKFGAFVELIPGKDGLVHISQLSTERVAK
VEDVVAIGDTITVKVTEIDPQGRVNLSRKAVLTSETGAKA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgtgtagaaatgcagctaggcggaagacgccttgtgctggaaacgggccga
ctagctaaacaagcaaacgcagccgttatggtgcgttatggggatacttcggtattatgt
accgttacggcttcgaaagagccgaaggacctggattttttcccgcttacagttaactat
gaggaaagattatatgcggtaggtaaaattccgggaggatttattaaacgggaaggtaga
ccgagtgagaaagcgattctgtccagccgtttgactgaccgaccaatcagaccactgttc
cctgaaggtttccgtaacgatgttcaggtattgaacatggtaatgagtgtggatcaggac
tgcgcaccagatattgctgctatgatcggtacttcagctgcacttagtatttcagatgtg
ccttttgatggacccatcggcggagttgctgtaggtcggattaatggagaatttgtgatc
aatccggatatggctcagcaagcaatcagtgatatttatgtagtggttgctggaacgaag
gaagcaatcatgatggttgaagcagaagcgaatgaagtgacggaagatgtgatgctcgaa
gcgattatgttcggtcatgatgaaatccgtaagatcgttgcaaccattgaagaactggtc
aaagtggctggtaaagaaaaaatggctgtgaagctgcatgcagtgaatgctgacgtgaat
actgaggtccgtgcatttgctgaagctcgtctggtggaagccgttaaaattgctgaaaaa
catgctcgtcaggaagcgattgatgtcgttaatgatgaagcggttgcgtatttcgtagag
aagtacatagaagcaccggagcttctgaaagatgttaaagaagtcctacatgatatcgtg
aaggatgaagtaagacgtctaatcacgcatgataaggttcgtccagatggacgtaaactt
gatgaaatccgtccgattgaatgtgatacaagcctgttaccgcgtacacatggttccggt
ctgttcacacgtggacaaacacaaatccttagcgtttgtacccttggagctctaggtgat
gtacaaatcctcgacggaatcgatcctactgaaacgaaacgtttcatgcaccattacaac
ttccctccgttcagcgtaggagaagctcgtccgcttagagcaccaggacgtcgtgaaatc
ggtcacggagcacttggagaacgtgcattatccaaggtaattcctagtgaaactgaattc
ccgtacacgattcgtctagtatcagaagcaattgaatctaacggttctacctcccaggca
agtatctgtgccagcattctggctatgatggacgctggtgtgccaatcaaagcaccagta
gccggagtagcaatgggtctgatcaaagacggagatcatgtctccatcctgacggatatt
caaggtatggaagatcatctcggagatatggacttcaaggtagctggtacagcagaaggt
gttacagctattcaaatggacattaagattgccggtatcgaccgcaacattcttcaagat
gcacttcagcaggctaaagaaggccgtctgttcatcttggacaaaatgaatgaagcgatc
tctgcgccaagacctaatctgtccaaatatgctccaaaaatcattattatcaacatcaat
ccggacaaaatccgtgatgttatcggtgctggtggtaagattatcaataaaattattgaa
gaaaccggcgtgaaaatcgacatcgaacaagatggccgtgtctttatcggttcttcagat
gaagaaatgatccaaaaggctcgttcgattatcgaaggtcttgtgcgtgaagtacaagtc
ggagaaatctatgtgggtacagttagacgtattgagaaatttggtgcatttgttgaactt
attccgggcaaagacggattggtacacatttcccaattgtctactgagcgtgtagctaag
gtagaagatgttgttgctattggtgacaccattaccgttaaagttaccgagatcgatcca
caaggccgggttaacctgtctcgtaaagcagtgttgacttcggaaactggagctaaagcg
taa
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