Paenisporosarcina cavernae: D3873_04470
Help
Entry
D3873_04470 CDS
T05647
Symbol
sigE
Name
(GenBank) RNA polymerase sporulation sigma factor SigE
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
paek
Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paek03021
]
D3873_04470 (sigE)
Transcription machinery [BR:
paek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3873_04470 (sigE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
HTH_31
HNF-1_N
HTH_19
HTH_23
Trp_repressor
MarR_2
Tk-SP_N-pro
HTH_Crp_2
HTH_28
Sigma70_r4_2
HTH_17
HTH_24
Phage_CII
HTH_37
KORA
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AYC29169
UniProt:
A0A385YR26
LinkDB
All DBs
Position
894888..895592
Genome browser
AA seq
234 aa
AA seq
DB search
MRTWWRKIYQWILHFRKKGTFYIGGHDALPTPMNREEEAATILAFQDGSDAARDTLIERN
LRLVVYIARRFENTATPMEDLISIGSIGLIKAIETFNLDKNIKLATYASRCIENEILMHL
RKTSKLKGEVSFDEPLNSDADGNELLLSDILGTDEHIITENVEKKLEKQSMVEAISTLDE
REKYIMECRFGLNGKEEMTQKEVADLLGISQSYISRIEKKIIVDLRAELNHSAM
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagaacatggtggcgtaaaatttatcagtggatacttcatttccgcaaaaaaggaacg
ttttatatcggtggtcacgatgcacttccaacaccgatgaatcgtgaagaggaagcagca
acgatccttgcttttcaagatggcagtgatgctgcgagggatacgttaatcgagcgaaat
ctgcgattagttgtgtatattgctcgacgttttgagaacactgcaacacctatggaagat
ttaatcagtatcggatctatcggtctaattaaagcgattgaaacatttaatttagacaaa
aatattaagttagcaacttatgcctctagatgtattgagaatgaaatactcatgcattta
cgaaaaacgagcaagttaaaaggagaagtgtcatttgatgaaccgttaaactccgatgca
gatggtaatgaattattactttcagacattcttggaacggatgaacatattattaccgaa
aatgtggaaaaaaaactcgaaaaacaatcgatggtagaagctatttccacgctggatgaa
cgtgaaaaatatattatggaatgtcggttcggattaaacggtaaagaggaaatgacacaa
aaagaagtggctgatttacttggtatttctcaatcgtatatttcacgaattgaaaaaaaa
ataattgtcgatttgcgagcagaattaaatcattctgctatgtaa
DBGET
integrated database retrieval system