KEGG   Paenisporosarcina cavernae: D3873_04470
Entry
D3873_04470       CDS       T05647                                 
Symbol
sigE
Name
(GenBank) RNA polymerase sporulation sigma factor SigE
  KO
K03091  RNA polymerase sigma-E/F/G factor
Organism
paek  Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:paek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paek03021]
    D3873_04470 (sigE)
Transcription machinery [BR:paek03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D3873_04470 (sigE)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 HTH_3 HTH_31 HNF-1_N HTH_19 HTH_23 Trp_repressor MarR_2 Tk-SP_N-pro HTH_Crp_2 HTH_28 Sigma70_r4_2 HTH_17 HTH_24 Phage_CII HTH_37 KORA HTH_25
Other DBs
NCBI-ProteinID: AYC29169
UniProt: A0A385YR26
LinkDB
Position
894888..895592
AA seq 234 aa
MRTWWRKIYQWILHFRKKGTFYIGGHDALPTPMNREEEAATILAFQDGSDAARDTLIERN
LRLVVYIARRFENTATPMEDLISIGSIGLIKAIETFNLDKNIKLATYASRCIENEILMHL
RKTSKLKGEVSFDEPLNSDADGNELLLSDILGTDEHIITENVEKKLEKQSMVEAISTLDE
REKYIMECRFGLNGKEEMTQKEVADLLGISQSYISRIEKKIIVDLRAELNHSAM
NT seq 705 nt   +upstreamnt  +downstreamnt
atgagaacatggtggcgtaaaatttatcagtggatacttcatttccgcaaaaaaggaacg
ttttatatcggtggtcacgatgcacttccaacaccgatgaatcgtgaagaggaagcagca
acgatccttgcttttcaagatggcagtgatgctgcgagggatacgttaatcgagcgaaat
ctgcgattagttgtgtatattgctcgacgttttgagaacactgcaacacctatggaagat
ttaatcagtatcggatctatcggtctaattaaagcgattgaaacatttaatttagacaaa
aatattaagttagcaacttatgcctctagatgtattgagaatgaaatactcatgcattta
cgaaaaacgagcaagttaaaaggagaagtgtcatttgatgaaccgttaaactccgatgca
gatggtaatgaattattactttcagacattcttggaacggatgaacatattattaccgaa
aatgtggaaaaaaaactcgaaaaacaatcgatggtagaagctatttccacgctggatgaa
cgtgaaaaatatattatggaatgtcggttcggattaaacggtaaagaggaaatgacacaa
aaagaagtggctgatttacttggtatttctcaatcgtatatttcacgaattgaaaaaaaa
ataattgtcgatttgcgagcagaattaaatcattctgctatgtaa

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