Pseudomonas aeruginosa LES431: T223_26225
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Entry
T223_26225 CDS
T02970
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pael
Pseudomonas aeruginosa LES431
Pathway
pael03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pael00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T223_26225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pael03019
]
T223_26225
03016 Transfer RNA biogenesis [BR:
pael03016
]
T223_26225
Enzymes [BR:
pael01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
T223_26225
Messenger RNA biogenesis [BR:
pael03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
T223_26225
Transfer RNA biogenesis [BR:
pael03016
]
Prokaryotic type
tRNA degradation factors
T223_26225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
AHC67763
LinkDB
All DBs
Position
complement(5605716..5607821)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVTKQFQFGQSTVTLETGRIARQATGAVLVTMDDVSVLVTVVGAKSPAEGRDFFPLSV
HYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVSTN
KKSDPDIAAMIGTSAALAISGIPFAGPIGAARVGFHPEIGYILNPTYEQLQSSSLDMVVA
GTEDAVLMVESEADELTEDQMLGAVLFAHDEFQAVIRAVKELAAEAGKPAWDWKAPAENT
VLVNAIKAELGEAISQAYTITIKQDRYNRLGELRDQAVALFAGEEEGKFPASEVKDVFGL
LEYRTVRENIVNGKPRIDGRDTRTVRPLRIEVGVLGKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGERKDAFMLHYNFPPFSVGECGRMGSPGRREIGHGRLARRGVAAMLPTQD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPVKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTDKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
VIAKPRAELSENAPTMLQMKIDSDKIRDVIGKGGATIRGICEETKASIDIEDDGSVKIYG
ETKEAAEAAKLRVLAITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDKRI
DKVTDVLQEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaaccaagcaattccagttcggtcagtcgaccgtcactctcgagaccggc
cgtatcgctcgccaggccaccggcgccgtactggtcaccatggacgacgtcagcgtgctg
gtcaccgtggtcggcgccaagtcgccggccgaaggccgcgacttcttcccgctgtccgtg
cactaccaggaaaagacctacgccgcaggccgtatccccggcggtttcttcaagcgtgaa
ggacgtccttccgagaaggaaaccctgacctcgcgcctgatcgaccgtccgatccgtccg
ctgttccccgaaggtttcatgaatgaagtgcaggtcgtctgcaccgtcgtttccaccaac
aagaagtccgatccggacatcgccgcgatgatcggtacctccgccgccctggcgatctcc
ggcattccgttcgccggcccgatcggcgccgcccgcgtcggtttccatccggaaatcggc
tacatcctcaaccccacctacgagcaactgcagagttccagcctggacatggtcgtggcc
ggtaccgaagacgccgtgctgatggtggagtccgaggccgacgaactgaccgaagaccag
atgctcggtgccgtgctgttcgcccacgacgagttccaggcggtgatccgtgccgtcaag
gagctggccgccgaagctggcaagccggcctgggactggaaagccccggcggaaaacacc
gtgctggtcaacgccatcaaggcagagctgggcgaagcgatctcccaggcctataccatc
accatcaagcaggaccgctacaaccgtctgggcgagctgcgcgaccaggccgtggccctg
ttcgccggcgaggaagagggcaagttcccggcttccgaggtcaaggacgtattcggcctg
ctggaataccgcaccgttcgcgagaacatcgtcaacggcaagccgcgtatcgacggtcgt
gacacccgtaccgtgcgtccgctgcgcatcgaagtcggcgtgctcggcaagacccacggt
tccgcgctgttcacccgtggcgaaacccaggccctggtcgtcgcgaccctcggcaccgcg
cgtgatgcccaactgctggataccctggaaggcgagcgcaaggacgccttcatgctgcac
tacaacttcccgccgttctcggtaggcgagtgcggccgcatgggcagcccgggtcgtcgt
gaaatcggccatggccgtctggcccgtcgtggcgtcgccgccatgctgccgacccaggac
gagttcccctacaccattcgcgtggtttccgagatcaccgagtccaacggttccagctcg
atggcctccgtgtgcggcgcctccctggcgctgatggatgccggtgtgccggtcaaggcg
ccggtcgccggtatcgccatgggcctggtcaaggaaggcgagaagttcgccgtcctgacc
gacatcctcggtgacgaagaccacctgggcgacatggacttcaaggttgccggtaccgac
aagggcgtcaccgccctgcagatggacatcaagatcaacggtatcaccgaagagatcatg
gagatcgccctgggccaggccctggaagctcgcctgaacatcctcggccagatgaaccag
gtcatcgccaagcctcgcgccgagctgtctgagaacgccccgaccatgctgcagatgaag
atcgactcggacaagatccgcgacgtcatcggcaagggcggcgcgaccatccgtggtatc
tgcgaagagaccaaggcctcgatcgacatcgaggacgatggcagcgtgaagatctacggc
gaaaccaaggaagccgccgaggccgccaagctgcgcgtcctggcgatcaccgcggaagcc
gagatcggcaagatctacgtcggcaaggtggagcgcatcgtcgacttcggtgccttcgtc
aacatcctgccgggcaaggacggcctggtgcatatctcgcagatcagcgacaagcgcatc
gacaaggtcaccgacgtgctgcaggaaggccaggaagtgaaggtcctggtgctcgacgtg
gacaaccgtggccgcatcaagctgtcgatcaaggacgtggctgccgccgaagcttccggc
gtgtaa
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