Pseudomonas aeruginosa MTB-1: U769_03500
Help
Entry
U769_03500 CDS
T02951
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
paem
Pseudomonas aeruginosa MTB-1
Pathway
paem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
U769_03500 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paem03021
]
U769_03500 (rpoB)
03400 DNA repair and recombination proteins [BR:
paem03400
]
U769_03500 (rpoB)
Enzymes [BR:
paem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
U769_03500 (rpoB)
Transcription machinery [BR:
paem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
U769_03500 (rpoB)
DNA repair and recombination proteins [BR:
paem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
U769_03500 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AHB53941
LinkDB
All DBs
Position
731176..735249
Genome browser
AA seq
1357 aa
AA seq
DB search
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGATKEQFRDIGLHAAFKSV
FPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTFAVPLRVKVRLIIFDRESSNKAIKD
IKEQEVYMGEIPLMTENGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARI
IPYRGSWLDFEFDPKDCVFVRIDRRRKLPASVLLRALGYSTEEILNAFYATNVFHIKGET
LNLELVPQRLRGEVASIDIKDGSGKVIVEQGRRITARHINQLEKAGVSQLEVPFDYLIGR
TIAKAIVHPATGEIIAECNTELTLDLLAKVAKAQVVRIETLYTNDIDCGPFISDTLKIDN
TSNQLEALVEIYRMMRPGEPPTKEAAETLFGNLFFSAERYDLSAVGRMKFNRRIGRTEIE
GPGVLSKEDIIDVLKTLVDIRNGKGIVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARTNKYGFLESPYRVVK
DSLVTDEIVFLSAIEEADHVIAQASATLNEKGQLVDELVAVRHLNEFTVKAPEDVTLMDV
SPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMERNVARDSGVC
VVARRGGVIDSVDASRVVVRVADDEVETGEAGVDIYNLTKYTRSNQNTCINQRPLVSKGD
VVARGDILADGPSTDMGELALGQNMRVAFMPWNGFNFEDSICLSERVVQEDRFTTIHIQE
LTCVARDTKLGPEEITADIPNVGEAALNKLDEAGIVYVGAEVQAGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDSRALSIEKMQLDQ
IRKDLNEEFRIVEGATFERLRAALVGAKAEGGPALKKGTEITDDYLDGLERGQWFKLRMA
DDALNEQLEKAQAYISDRRQLLDDKFEDKKRKLQQGDDLAPGVLKIVKVYLAIKRRIQPG
DKMAGRHGNKGVVSVIMPVEDMPHDANGTPVDIVLNPLGVPSRMNVGQILETHLGLAAKG
LGEKINRMLEEQRKVAELRKFLHEIYNEIGGREENLDELGDNEILALAKNLRGGVPMATP
VFDGAKEREIKAMLKLADLPESGQMRLFDGRTGNQFERPTTVGYMYMLKLNHLVDDKMHA
RSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMY
KNIVDGDHRMEAGMPESFNVLIKEIRSLGIDIELETE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcatacactgagaaaaaacgtatccgcaaggactttagcaagttgccggac
gtcatggatgtgccgtatttgctggccatccagctggattcctatcgcgaattcctgcag
gctggcgcaaccaaggagcagttccgcgatatcggtctgcacgcggccttcaagtccgtt
ttcccgattatcagctattccggcaatgctgccctggaatacgtcggctaccgtctgggt
gagccggcattcgatgtcaaggagtgcgtgctgcgcggcgtgaccttcgccgtaccgctg
cgcgtgaaagttcgcctgatcatcttcgaccgcgagtcgtcgaacaaggcgatcaaggac
atcaaggaacaagaagtctacatgggggaaatccccctgatgaccgagaacggtaccttc
atcatcaacggtaccgagcgtgtcatcgtctcccagctgcaccgttccccgggcgtgttc
ttcgaccacgaccgtggcaagacccacagctccggcaagctgctgtactccgcgcggatc
attccttaccgcggttcctggctggacttcgagttcgatccgaaggactgcgtgttcgtc
cgtatcgaccgtcgccgcaagctgccggcctcggtactgctgcgtgcgctcggctacagc
accgaagagatcctcaacgccttctacgcgaccaacgtcttccacatcaagggcgaaacc
ctgaacctggaactggtcccgcagcgcctgcgcggtgaagtcgcgagcatcgacatcaag
gatggcagcggcaaggtgatcgtggagcaggggcgtcgtatcactgcccgccacatcaac
cagctggaaaaggctggcgtgagccagctggaagtgccgttcgactacctgatcggccgt
accatcgccaaggcgatcgtgcatccggctaccggcgagatcatcgccgagtgcaacacc
gagctgaccctcgacctcctggccaaggtggccaaggcccaggtcgtgcgcatcgagacc
ctgtacaccaacgacatcgactgcggtccgttcatctccgacaccctgaagatcgacaac
accagcaaccagctggaagccctggtcgaaatctaccggatgatgcgtccgggcgagccg
ccgaccaaggaagctgccgagaccctgttcggcaacctgttcttcagcgccgagcgttac
gacctgtcggccgtgggccggatgaagttcaaccgccgtatcggtcgtaccgagatcgaa
ggtccgggcgtcctgagcaaggaagacatcatcgatgtgctcaagaccctcgtcgacatc
cgtaacggcaagggcatcgtcgatgacatcgaccacctgggcaaccgtcgtgtccgttgc
gtcggcgaaatggccgagaaccagttccgcgtgggcctggtgcgtgtcgagcgcgcggtc
aaggaacgcctgtccatggccgaaagcgaaggcctgatgccgcaggacctgatcaacgcc
aagccggtggctgccgcgatcaaggagttcttcggttcgagccagctgtcgcagttcatg
gaccagaacaacccgctttccgagatcacccacaagcgccgcgtctccgcgctcggcccg
ggcggtctgacccgtgagcgtgcgggcttcgaggttcgtgacgtacacccgacccactac
ggccgcgtgtgcccgatcgaaacccctgaaggtccgaacatcggcctgatcaactccctg
gcgacctacgcccgcaccaacaagtacggcttcctcgagagcccgtaccgcgtggtcaag
gacagcctggtaaccgacgagatcgtgttcctgtcggcgatcgaagaagccgaccacgtc
atcgcccaggcttcggcgaccctcaacgagaagggtcaactggtggacgagctggtggcc
gtgcgtcacctgaacgaattcaccgtgaaggcgccggaagacgtgaccctgatggacgtg
tcgccgaagcaggtcgtttccgtcgctgcctcgctgattccgttcctcgagcacgatgac
gccaaccgcgcactcatgggctcgaacatgcagcgtcaggccgtgccgaccctgcgtgcc
gacaagccgctggtgggtaccggcatggagcgcaacgtggcgcgcgactccggcgtctgc
gtcgtggctcgccgtggcggtgtgatcgactcggtcgatgccagccgtgtcgtggttcgc
gtggcggatgacgaggtcgagaccggcgaagcgggtgtcgacatctacaacctgaccaag
tacacccgttccaaccagaacacctgcatcaaccagcgtccgctggtgagcaagggtgac
gtggttgcgcgcggcgacatcctggccgacggtccgtccaccgacatgggcgaactggcc
ctgggccagaacatgcgcgtagcgttcatgccctggaacggcttcaacttcgaagactcc
atctgcctgtccgagcgcgtggtccaggaagatcgtttcaccacgatccacatccaggaa
ctgacctgcgtcgctcgtgacaccaagcttggcccagaggaaatcaccgcggacatcccg
aacgtgggcgaggccgcgctgaacaagctggacgaagccggtatcgtctacgtcggcgcc
gaagtgcaggccggcgacatcctggtcggcaaggtcactccgaaaggcgagacccagctg
actccggaagagaagctgctgcgcgcgatcttcggtgagaaggcgtccgacgtgaaggac
acctccctgcgtgtgccgaccggcaccaagggtaccgtcatcgacgttcaggtcttcacc
cgcgacggcgtcgagcgcgactcccgcgcgctgtccatcgagaagatgcaactcgaccag
atccgcaaggacctgaacgaagagttccgcatcgtcgaaggcgcgaccttcgagcgtctg
cgtgccgccctggtcggtgccaaggctgaaggtggcccggcgctgaagaagggcacggag
atcaccgacgactacctcgacggcctcgagcgcggccagtggttcaagctgcgcatggcc
gacgacgccctgaacgaacagctggagaaggcccaggcctacatcagcgatcgtcgccag
ctcctggacgacaagttcgaggacaagaagcgcaagctgcagcagggcgacgacctggct
ccgggcgtgctgaagatcgtcaaggtctacctggcgatcaagcgtcgcatccagccgggc
gacaagatggccggccgtcacggtaacaagggtgtggtctcggtgatcatgccggtggaa
gacatgccgcacgatgccaacggcaccccggtcgacatcgtcctcaacccgctgggcgta
ccgtcgcgtatgaacgtcggccagatcctcgaaacccacctgggcctcgcggccaagggg
ctgggcgagaagatcaaccgcatgctcgaagagcagcgcaaggtcgccgaactgcgtaag
ttcctgcacgagatctacaacgagatcggcggtcgcgaggaaaacctcgacgagctgggc
gacaacgagatcctcgcgctggccaagaacctgcgcggtggcgtaccgatggcgaccccg
gtgttcgatggcgccaaggaacgcgagatcaaggccatgctgaagctggccgacctgccg
gaaagcggccagatgcgtctgttcgacggccgtaccggcaaccagttcgagcgtccgacc
accgtcggctacatgtacatgctcaagctgaaccacctggtggacgacaagatgcacgcc
cgctccaccggctcgtacagcctggttacccagcagccgctgggtggtaaggcacagttc
ggtggtcagcgcttcggtgagatggaggtgtgggcgctggaagcctatggcgcggcgtac
accctgcaggaaatgctgacggtcaagtcggacgacgtgaacggccggaccaagatgtac
aagaacatcgtggacggtgatcaccgcatggaggccggcatgcccgagtccttcaacgtt
ctgatcaaagagatccgttcgctcggcatcgacatcgaactggaaaccgaataa
DBGET
integrated database retrieval system
