Paenibacillus sp. FSL P4-0081: P40081_29100
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Entry
P40081_29100 CDS
T03332
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
paen
Paenibacillus sp. FSL P4-0081
Pathway
paen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P40081_29100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paen03021
]
P40081_29100
Transcription machinery [BR:
paen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P40081_29100
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AIQ31738
UniProt:
A0A7U4HLE8
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Position
complement(6529988..6531121)
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AA seq
377 aa
AA seq
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MANDQHTELEAEFTLDQVKDQLIDHGKKRSSLNYKDIMEKLSPFDQDPEQMEEFYEQLSD
LGIEVVNENDEEVNSLRPSEENEDKDSDDFSFDDDLSLPPGIKINDPVRMYLKEIGRVPL
LSADDEVELAMRIKNGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKA
VEKFDHNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELG
REPSPEEIAAEMELTVEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQEALAPADAA
AYELLKEQLEDVLDTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKAL
RKLRHPSRSKRLKDFLE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatcagcatactgaactggaagcggaatttactctggatcaggttaaggac
cagcttattgaccatggtaagaaaagatcatcattgaactacaaagatattatggagaaa
ttatcgccgtttgatcaagaccccgagcagatggaggaattctacgagcagctgagcgat
ctggggatcgaagttgtgaatgagaatgatgaagaggttaacagcctccggccaagtgag
gagaatgaggacaaagacagcgatgatttcagcttcgacgatgatctgtcgctgcctccg
ggcatcaagatcaacgaccccgtccggatgtatctgaaggaaatcgggcgtgttccgctg
ttatcggctgacgatgaagtggaactggcaatgagaatcaagaatggtgacgaggaagcg
aagcggagacttgctgaagcgaacctgcggctcgtagtcagtatcgccaaacgttatgtc
ggacgcggcatgctgttcctggacttgattcaggaaggcaacatgggtctgatcaaggcc
gttgagaaatttgaccacaataaaggcttcaaattcagtacctatgctacctggtggatt
cgtcaggcgattacccgcgcgattgccgaccaggcacgtacgatccgtattcctgtgcac
atggtggaaaccatcaacaaattgatccgggtctcccgccaattgctgcaggagctggga
cgtgagccttcgccggaagagatagcggctgagatggaactgaccgttgagaaggttcgg
gaaatcatgaagattgcccaagagccggtatcactggaaacaccaatcggtgaggaagat
gattcgcatctgggagatttcattgaggatcaggaggcgcttgcgcctgcggatgcagcg
gcttatgagctgctgaaggaacagctggaggatgtgctggacacgctcaccgagcgtgaa
gagaacgtgcttcgcctgcgcttcggactggatgacggacggacgagaaccctcgaagaa
gtgggtaaggtgttcggtgttacccgcgagcgtatccgccagattgaagccaaagcactg
cgcaagctgcgtcacccgagccgcagtaagcggttgaaggatttcctcgaatag
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