Pseudomonas aeruginosa PA1: PA1S_03650
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Entry
PA1S_03650 CDS
T02928
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
paep
Pseudomonas aeruginosa PA1
Pathway
paep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PA1S_03650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paep03400
]
PA1S_03650
DNA repair and recombination proteins [BR:
paep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PA1S_03650
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PA1S_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
BCA_ABC_TP_C
AAA_23
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
APS_kinase
Zn-ribbon_8
cobW
AAA_21
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHA18078
LinkDB
All DBs
Position
complement(761073..763910)
Genome browser
AA seq
945 aa
AA seq
DB search
MDKILIRGARTHNLKNVDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDIPLEAQTVSQMVDQVLALPEGSKLMLLAPVIRERKGEHLAVFDEMRAQGFVRARVD
GKLYELDEVPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALSLADGIALVAPMDED
EDVEEIIFSARFACPVCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDARRVVNGEL
TLAEGAIRGWDRRNVYYFQMLGSLAQHYGFSLEEPFDELGAEHQKVVLYGSGRENVDFRY
LNDRGDIVKRSHPFEGILPNLERRYRETESATVREELAKFLSTQPCPDCHGTRLRREARH
VWVGDRTLPAITAMPVGEACEYAAGLSLTGRRGEIAAKILKEIRDRLQFLVNVGLDYLTL
DRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLTHLRNLGNT
VIVVEHDEDAIRLADYVVDIGPGAGVHGGQVVAEGTPDQVMNHPDSLTGKYLSGRKKIAV
PAKRTPRDKKKLLKLKGARGNNLQNVNLEIPVGLFTCITGVSGSGKSTLINNTLFPITAT
ALNGATTLEVAPYDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFSGVPE
ARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEIRY
KGKSIHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL
SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW
LVDLGPEGGSKGGQIIANGTPEQVAEMSQSHTGHFLKPLLERDRA
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtggataagatcctgattcgtggggcgcgtacccacaacctgaagaacgtcgacctcaca
ctgccacgcgacaaactgatcgtgatcaccggtctttccggttccggcaagtcttccctg
gctttcgacacgctctatgcggaaggccagcggcgctacgtggaatccctctcggcctac
gcccggcagttcctgtcgatgatggagaagccggacgtggacaccatcgaagggctgtcg
ccggcgatttccatcgaacagaagtccacttcccacaacccacgctccaccgtgggtacg
atcaccgagatctacgactacctgcgcctgctttatgcccgcgtcggtaccccgcgctgc
ccggaccacgacatcccgctggaggcgcagaccgtcagccagatggtcgaccaggtcctg
gccctgccggaaggcagcaagctgatgctgctggcgccggtgatccgcgagcgcaagggc
gagcacctggcggtgttcgacgagatgcgcgcgcagggcttcgtccgcgcccgggtcgac
ggcaagctctacgaactcgacgaagtgccgaagctggataagcagaagaagcacagcatc
gatgtggtggtggaccgcttcaaggttcgcgcggacctccagcaacgcctggccgagtcg
ttcgagaccgccctgtccctggccgacggtatcgccctggtagcaccgatggacgaggac
gaggatgtcgaggagatcatcttctcggcgcgcttcgcctgcccggtctgcggccactct
atcagcgagctggaacccaagctgttctccttcaacaacccggccggcgcctgtccgacc
tgcgacggcctcggcgtgaagcaattcttcgacgcgcgccgggtggtcaacggcgagttg
accctggccgagggcgcgatccgcggctgggaccggcgcaacgtctattacttccagatg
ctcggttcgctggcccagcattacggcttcagcctggaagaacccttcgacgaactcggc
gccgaacaccagaaggtggtgctctacggctccggccgggaaaacgtcgacttccgctat
ctcaacgaccgcggcgacatcgtcaagcgctcgcaccccttcgaaggcatcctgccgaac
cttgagcggcgctaccgcgagaccgagtcggccacggtccgcgaggagctggccaagttc
ctcagcacccagccctgcccggattgccacggtacccgcctgcgccgcgaggcgcggcat
gtgtgggtcggcgaccggacgctgccggcgatcaccgcgatgccggtcggcgaagcctgc
gagtatgccgccggactcagcctgaccggccgccgtggcgagatcgcggcgaagatcctc
aaggaaatccgcgaccgcctgcaattcctggtcaacgtcggcctcgactacctgaccctc
gaccgcagcgccgacaccctgtccggcggcgaagcccagcgcatccgcctggccagccag
atcggcgccggcctggtgggagtgatgtacatcctcgacgaaccctcgatcggcctgcac
caacgcgacaacgagcgcctgctcggcaccctcacccacctgcgcaacctcggcaacacg
gtgatcgtggtcgagcacgacgaggacgcgatccgactcgccgactacgtcgtcgacatc
ggtccgggcgccggcgtgcacggcggccaggtagtggcggaaggtacgcccgaccaggtg
atgaaccaccccgactcgctgaccggcaagtacctttccgggcgcaagaaaatcgcggtt
ccggccaagcgcaccccgcgcgacaagaagaagctgctgaagctgaaaggcgcccgcggc
aacaacctgcagaacgtcaacctggaaatcccggtcggcctgttcacctgcatcaccggg
gtctcgggctccggcaagtcgacgctgatcaacaacaccctgttcccaatcaccgccacc
gcgctgaacggcgcgactaccctggaagtggcgccgtatgactcgttcgacggcctgcag
cacctggacaaggtggtcgacatcgaccagagcccgatcggtcgtaccccgcgctccaac
ccggcgacctataccggcctgttcacgccgatccgcgaactgttctccggcgtgccggag
gcccgctcgcgcggctacggtcccggccgcttctcgttcaacgtcaagggcggccgttgc
gaggcctgccagggcgacggcgtgatcaaggtggagatgcacttcctgccggacatctac
gttccctgcgatgtctgcaagggcaagcgctacaaccgcgagaccctggagatccgctac
aagggcaagagcatccacgaggtgctggagatgaccatcgaggaagcccgcgagttcttc
gacgccgtccccgccctggcgcgcaagctgcagacgctgatggacgtcggcctgtcctac
atcaagctgggccagagcgcgaccaccctctcgggcggcgaggcacaacgggtcaagctg
tcccgcgagctgtccaagcgcgataccggcaagaccctgtacatcctcgacgaaccgacc
accggcctgcatttcgccgacatccagcaactgctcgacgtgctccaccgcctgcgcgac
cacggcaacaccgtggtggtgatcgagcacaacctggacgtgatcaagaccgccgactgg
ctggtcgacctcggccccgagggcggctccaagggcggccagatcatcgccaacggcacg
ccggagcaggtggccgagatgtcccagtcgcacaccggccacttcctcaagccgttgctg
gaacgcgatcgcgcctga
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