Paenibacillus sp. FSL R5-0912: R50912_01065
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Entry
R50912_01065 CDS
T03334
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq00040
Pentose and glucuronate interconversions
paeq01100
Metabolic pathways
paeq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
R50912_01065
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R50912_01065
Enzymes [BR:
paeq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
R50912_01065
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Gene cluster
GFIT
Motif
Pfam:
CBM77
Pectate_lyase_4
Beta_helix
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
AIQ38798
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Position
221318..223456
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AA seq
712 aa
AA seq
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MKRTVAKVTSIVLLFSLALSLIAGGWGTTVAHAAGLTITGSGGGNEAAYVEWSPVSNASG
YNVYVKAAGAADSQYQQINNELIRKYSSYWRADAVGLAAGSYVLKVEAVSSGAVTANAVS
GTLAVAAYDRSGFAFSAHSQFGTGSGAYNDNGTLKSGAQVLYITSQNAQTVTLDVKTSSS
GTVQTGVGLGGILTLRQKGYDTSPLAIRIIGKVTASDLSGQLNSSGYLEVKGKNNYTEMN
ITIEGIGKDAYAYGWGMLLRYTGNVEVRNLGVMLFPDDGISMDTGNANVWVHNNDIFYGS
AGGDADQAKGDGSTDLKKGSTYITISYNHYFDSGKAALVGLSESAEFFVTFHHNWFDHSD
SRHPRIRVASVHVYNNFYDGVSKYGVGVTTGASAFVESNVFRNTKDPMLSSLQGTDAIGE
EGTFSGENGGMIKAYNNSIVGAASLIYANSSTGTAPANATSFDAYLASSRNETVPSSYKA
LVGGTAYNNFDTSVDTGVSASDVDNVSTVEQVVTAKAGRQGGGDFIWAFNDAVDDASYAL
NAALMSAIRNYTTGLVSVGGNSSPVGPTPTPSATPVPTATPAPTATPAPTATPVPTATPT
PTTGAIVHNFTTSGTTSSFFSISGNLSTSKGTVVYSGLTLSQCLKIESATSIGFTAAQAS
TLTLVFNSEGTKVKVDGTSYPITNGIATVSLAAGAHTITKDSTANLYYMELK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggacagttgcaaaggtaaccagtatagttttgctattttctcttgcactatct
ctgatcgccggcggatggggaactacggtagcacacgctgcgggtcttacgataacgggc
agtggaggcggaaatgaagccgcttatgtggagtggtcaccagtaagcaatgcatcggga
tataatgtatatgttaaagcagcgggcgcagcggactcccagtatcagcagattaataac
gagttgatccgcaagtattcttcctattggagagctgatgcggtagggcttgcagccgga
agttatgtgttgaaggttgaggccgtatcgtcaggcgcagtgacggcaaatgctgtctca
ggaacgctggcggtagcggcgtatgaccggtctggatttgctttttcagcccattcgcaa
tttggtacaggctcaggtgcttataatgataatgggacgctcaaaagcggggcacaggtg
ctgtatatcacttcccagaatgcgcaaaccgtaacgctcgatgtgaaaaccagcagctcg
ggtaccgtacagaccggggtgggtcttggcggaattctgacactgagacaaaaaggctat
gatacatcgccgctggccatccggattatcggaaaagtaacagcatctgatctgagcgga
cagctcaacagcagcggttatcttgaagtcaaaggtaaaaacaattatacggaaatgaat
attaccattgagggtatcgggaaagatgcttacgcctatggctggggaatgctgcttaga
tataccgggaatgtggaagtaagaaacctgggcgtgatgttattccctgacgacggtatt
tccatggatacaggcaatgcgaatgtatgggtgcataataacgatattttctacggatct
gcagggggtgatgcggaccaggctaagggtgacggttctacagacctcaagaagggctca
acgtatatcactatctcctacaaccactattttgattccggaaaagcggctctagtcgga
cttagtgagtcggcagaattctttgttaccttccatcacaactggttcgatcattcggac
tcccgtcatccgcggatcagagtggcatcagttcatgtctacaacaacttctatgatgga
gtctcgaaatatggtgtgggcgttacaaccggagcttcggcttttgtagaatccaatgtg
ttcagaaatactaaagatccaatgctgagttccttacagggtacggatgctataggggag
gaaggcacattctctggcgaaaatggagggatgatcaaagcctacaacaatagcattgtt
ggtgcggcaagtctgatctatgccaactccagtaccggaactgctccggcaaatgctacc
tcgtttgatgcctacttagcttcttcgagaaatgagaccgtcccaagctcatacaaagct
ctagtcggcggaacggcttataacaactttgatactagcgtcgatactggtgtcagtgca
tctgatgttgataacgtaagcacagttgaacaggtcgttacggcaaaagccggacgccag
ggcggtggagacttcatatgggcttttaatgacgctgtggatgacgcatcgtacgcgctg
aatgcagcactgatgtccgcaatcagaaattatactacgggtcttgtatcggtaggcggc
aattccagtccggttggaccgactccgactccatcagcaacacctgtaccaacggcaacg
cctgctccgacggcaacacctgcgccaacggcaactccggtgccgactgcaacaccaacg
cccactaccggggcaattgttcataacttcactacatccggaacaaccagcagcttcttc
tctatttcggggaatctctccacgagcaagggaactgtggtgtatagcggtctgacccta
agccaatgtctgaaaatcgagagcgcaaccagcattgggttcacagcagcccaagcttca
accttaacgttagtgttcaactcggaaggaacgaaggtcaaagtggatggaaccagctat
ccgatcacgaatggtattgctacagtctcgctcgcagcgggtgcgcatacaattacgaag
gatagtactgcgaatttgtattatatggagctgaaatag
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