Pantoea agglomerans C410P1: BEE12_09325
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Entry
BEE12_09325 CDS
T04739
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pagc
Pantoea agglomerans C410P1
Pathway
pagc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BEE12_09325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pagc03019
]
BEE12_09325
03016 Transfer RNA biogenesis [BR:
pagc03016
]
BEE12_09325
Enzymes [BR:
pagc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BEE12_09325
Messenger RNA biogenesis [BR:
pagc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BEE12_09325
Transfer RNA biogenesis [BR:
pagc03016
]
Prokaryotic type
tRNA degradation factors
BEE12_09325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
Spt6_S1
SLS1_KH2
Motif
Other DBs
NCBI-ProteinID:
AOE40035
LinkDB
All DBs
Position
2053763..2055898
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKSKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLISRLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVHPDIVAMIGASAALALSGLPFNGPIGSARVGYINDQYVLNPTADELKQSRLDLVVA
GTQNAVLMVESEAEILSEEQMLGAVVFGHDQQQIVIENINALVAEAGKPRWDWQPEAANT
ALISRVAALAEARISDAYRITDKQERYTQVGVIKDETIAALLAEDETLDGSEIGDIVHSL
EKTVVRTRILNGEPRIDGREKDMIRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTTR
DAQNLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKAED
FPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQEALNQARGARLHILGVMEQA
ISTPRTEISEFAPRIYTIKISSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEIEVGRVYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRVRLSIKEATESKPQAEEAVAVTTPDAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgtacgcaaattccaatatggtcaacataccgtcacgctggaaacc
ggcatgatggctcgccaggcgacagccgctgttatggtgagcatggacgatactgcagta
ttcgtcactgtagtaggtcagaaaaaatctaaaccaggtcaggatttcttcccactgacc
gtgaactatcaggagcgtacttacgctgctggtcgtatcccaggcagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatttcgcgtctgattgaccgcccgattcgt
ccgctgttcccggaaggttttgttaacgaagttcaggttatcgccactgttgtctctgtg
aacccacaggttcatccggacatcgttgccatgatcggtgcttctgctgcactggcgctt
tctggtctgccgttcaatggcccaattggttctgcgcgtgttggttacatcaacgatcaa
tatgtcctgaacccaaccgcagatgagctgaaacagtctcgtctggatctggtggttgcc
ggtacgcagaatgccgttctgatggttgaatctgaagctgagatcctgtcagaagagcag
atgctgggcgccgtggtctttggccatgaccagcagcagatcgttattgaaaacatcaat
gccctggttgctgaagcgggcaaaccacgctgggactggcagccagaagcggccaatacc
gcactgatttctcgtgttgctgccctggcagaagcgcgcatcagcgatgcttaccgcatc
actgacaagcaggagcgttacacgcaggttggcgtcattaaagacgaaaccatcgctgcg
ctgctggctgaagatgaaacgctggatggttcagaaatcggcgacatcgtgcatagcctt
gaaaaaaccgttgttcgtactcgcatcctgaatggcgagccacgcatcgatggtcgtgaa
aaagatatgatccgtggtctggatgtgcgtactggcgtattgccacgtacacacggttca
tcactgttcactcgtggtgagacgcaggcactggttactgcaacgctgggtacgacccgc
gatgcgcagaaccttgatgagctgatgggcgaacgtaccgacagcttcctgttccattac
aacttccctccatactctgttggcgaaaccggcatggtaggttcgccgaagcgtcgtgag
attggtcacggtcgtctggcgaagcgcggcgtgttagcggtaatgcctaaagcggaagat
ttcccttacaccattcgtgttgtttctgaaatcaccgaatctaacggctcttcttcaatg
gcctctgtctgtggtgcctcactggcgctgatggatgcaggtgtgccaatcaaagccgcc
gttgccggtatcgcaatgggtctggtgaaagaagatgagaagtttgttgttctgtctgac
atcctgggcgatgaagatcacctgggcgacatggacttcaaagtagccggtagccgtgaa
ggtatcaccgcgctgcagatggacatcaaaatcgaaggcatcacgcgtgaaatcatgcag
gaagcgctgaaccaggcccgaggtgcgcgtctgcacattctgggcgttatggaacaggct
atcagcacaccgcgtactgagatttctgaattcgcaccacgcatttacaccatcaaaatc
agctctgacaagatcaaagatgtgatcggtaaaggcggctcagtgattcgtgcactgacc
gaagagaccggcacaacgattgaaattgaagatgacggcaccgtgaaaatcgctgcgacc
gatggtctgaaagcgaaagaagcgattcgtcgtatcgaagagattaccgcagagatcgaa
gtgggccgcgtttacagtggtaaagtgacccgtatcgttgacttcggcgccttcgttgca
atcggcggcggtaaagaaggtctggttcacatttcacaaatcgctgataagcgcgttgag
aaagtgaccgactatctgcagatgggtcaggaagtaccggttaaggtgatggaagttgat
cgccagggccgtgtacgtctgagcatcaaagaagcgacagaatctaagccgcaggctgaa
gaagctgtcgcggtgaccacgcctgacgctgaataa
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