Pteropus alecto (black flying fox): 102889507
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Entry
102889507 CDS
T02993
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102889507 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pale00536
]
102889507 (COL25A1)
Glycosaminoglycan binding proteins [BR:
pale00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102889507 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102889507
NCBI-ProteinID:
XP_006918973
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MLLKKPAGKGGAREPGSEDSSSAGLRCARTMPPCAALAALLSVVAVTSCLYLGVKTNDLQ
ARIAALESAKGDPSICLLPDCLDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPLECNC
PAGPPGKRGKRGRRGESGPPGQAGPRGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGFMGPLG
PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGESGPKGDTG
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGERGEAGPPGRGERGEPGTPGLKGKQGESGSRGPKGSKGDRGDKGDSGTLGPRGPPGQK
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGIPGVDGEQGL
KGSKGDVGDPGVPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAVGEPGPRGPYGLPGKDGEPGLDGFP
GPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaagaagcctgcagggaaaggaggggcccgggagccgggctccgaggactcc
agctccgctgggctgcgttgtgccaggaccatgcccccgtgcgcagctctggcagccctc
ttgtcagttgtggccgtaacgtcttgtctgtacctgggggtgaaaaccaacgacctccag
gcgaggatcgccgctctcgaatccgccaaaggggacccttccatctgtctgcttcctgat
tgcctggatcagctcaaagcaatggtgcaagagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaatagcaagagaagcacctttagaatgcaactgc
ccagcaggccctccaggaaaacgaggtaagagaggccgaagaggagaatctggtcctcct
ggtcaggctggtcctcggggtcctcctggtccaaaaggtgataagggagaacaaggtgat
caaggacctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctgattaagggtgaccaaggacaggctggacctccaggcccccca
ggccctccaggcccaagagggcctcctggggacacagggaaagatggcccccgtggaatg
ccaggagtgcccggtgaaccagggaaaccaggagaacaaggcttcatgggtcctctgggg
cctccaggacaaaagggttctattggagcacctggaattccagggatgaatgggcaaaag
ggtgaacctgggttgcctggagcagtaggacaaaatggaataccagggccgaagggagaa
cctggagaacaaggagaaaagggagatgctggagagagtggccccaaaggtgacacaggc
gaaaagggtgaccctggatcatctgctgcaggaatcaagggagaacctggagaatctggc
cgtccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcaaggggagccaggcttaccagggttaccaggaaca
aaaggtgaacgaggggaggcagggcctcctggaagaggtgagcgaggggagcctggaacc
cctggactgaagggaaaacaaggtgaatcaggatctaggggcccaaaggggtcaaagggt
gaccgtggagacaaaggagactctggaacgctgggaccaaggggcccacctggtcaaaag
ggggatcaaggagccacggagattatagactataatggcaacctccatgaagccttgcag
aggattaccaccttaactgttacgggtccccctggaccaccaggacctcaaggactacaa
gggccaaagggagagccaggatctccaggaatcccaggagttgatggagagcagggactc
aaaggctcaaagggagatgtgggggacccaggtgtgccaggtgaaaaaggaggaatcgga
ttacctggattaccgggtgccaacgggatgaagggggaaaaaggagactccggattgcca
ggtcctcagggcccttctatcatcggcccaccaggccctccaggtccccatggcccacca
ggccccatgggaccccatggacttcctggaccaaagggtacagatggccctatgggaccc
catggccctgcaggtcccaaaggagaaagaggcgaaaaaggagctgtgggagagcccggc
cccagagggccctatggactgcctgggaaagatggagagcctggtcttgatggcttccct
ggtccacgaggcgagaagggtgatctaggagaaaagggagaaaagggattccgtggcgtt
aagggggaaaaaggggagccaggccagcctggcctggatgggctggatgccccttgccaa
ttggggccagatggattacctatgcctggctgttggcaaaagtga
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