Pteropus alecto (black flying fox): 102895944
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Entry
102895944 CDS
T02993
Symbol
PBRM1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03082
ATP-dependent chromatin remodeling
pale05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102895944 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102895944 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pale03021
]
102895944 (PBRM1)
03036 Chromosome and associated proteins [BR:
pale03036
]
102895944 (PBRM1)
Transcription machinery [BR:
pale03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102895944 (PBRM1)
Chromosome and associated proteins [BR:
pale03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
102895944 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
DUF7877
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102895944
NCBI-ProteinID:
XP_015449158
LinkDB
All DBs
Position
Unknown
AA seq
1710 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPSYLKEILEQLLEAIVVATNPSGHLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMAKSSLRMRTSSNLAAARMTGPSHSKSSLGEERNPTSKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIR
KQRMKILFNVVLEAREPGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK
YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDMASPKL
KLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLT
IKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET
RRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAXIPAVDPNFPNKPP
LTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDEL
CKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAG
LSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFY
RPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVC
ESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDS
RTEESFNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRI
EKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCSVLSFK
DFLSCRPTEIPENDVLLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQK
EPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLTSELDLMPYT
PPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRN
LETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALMGVVPPPTPMGMLNQQ
LTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVM
NQGVTPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPP
KTQRLLHSEAYLKYIEGLSAESSSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAH
TTMADALWRLRDLMLRDTLNIRQAYNLENL
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat
tcaatgggttccaagagaagaagagctacttccccttccagtagtgtcagtggggacttt
gacgacgggcaccattccgtgtccacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccaactgtagatcctattgctgtgtgccatgaactctacaacactatccgagac
tataaggatgaacagggcaggctcctctgtgagctcttcattagggcaccgaagcgaaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaattcaacag
aaactaaaaatggaggagtatgatgatgtgaatctgctgactgctgacttccagctgctt
tttaacaatgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaa
ctctgggatctgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgat
gaagatgatgatgaagatgggcaagacaatcaaggcacagtgactgaaggatcttctcca
agttacttgaaggagatcctggagcagcttcttgaagccatagttgtagccacaaatcca
tcaggacatcttattagcgaactttttcagaaactgccttctaaagtgcaatatccagac
tattatgcaataattaaggaacctatagatctcaagaccattgcccagaggatacagaat
ggaagctacaagagtattcatgcaatggccaaagatatagatctcctagcaaaaaatgcc
aaaacttataatgagcctggttctcaagtattcaaggatgcaaattctattaaaaaaata
ttttatatgaaaaaggcagaaatcgaacatcatgaaatggctaaatcaagccttcgaatg
agaacttcatcaaatttggctgcagccaggatgacaggtccttctcacagtaaaagcagc
cttggtgaagagagaaatcctactagcaagtattaccgtaataaaagagcagtccaaggg
ggtcgtttatcagcaataaccatggcacttcagtatggctcagaaagtgaagaggatgct
gctttagctgctgcacgttatgaagaaggagagtcagaagcagagagcattacttcattt
atggatgtttcaaatcctttttatcagctttatgatacagttaggagctgtcggaataac
caggggcagctaatagctgaaccttttttccatttgccttcaaagaagaaataccctgat
tattatcaacaaattaaaatgcccatatcactacaacagattagaacaaagctaaagaac
caagaatatgaaactttggatcatttggagtgcgatctgaatttaatgtttgaaaatgcc
aaacgctataatgttcccaattcagctatctacaaacgagttctaaaattgcagcaagtc
atgcaggcaaagaagaaggagcttgccaggagagacgacattgaggatggagacagcatg
atctcttcagccacctctgatactggtagcgccaaaagaaaaagtaaaaagaacataaga
aagcagcgaatgaaaatcttattcaatgttgttcttgaagctcgtgaaccaggtacaggc
agaagactttgtgatctgtttatggttaaaccatccaaaaaggactatcctgattattat
aaaatcatcttggagccaatggacttgaaaataattgagcataacatccgcaatgacaaa
tatgcaggagaagaaggtatgatagaagacatgaagctgatgttccggaatgccaggcac
tataacgaggagggttcccaggtttacaacgatgcccacatcctggagaagttactcaag
gataaaaggaaagagctgggccctctgcctgatgatgatgacatggcttctcccaaactc
aagctgagtaggaagagtggcatttctcctaaaaaatcgaaatacatgactccaatgcag
cagaaactaaatgaagtctatgaagctgtaaagaactatactgataagaggggtcgccgc
ctcagtgccatatttctgaggcttccctctagatctgaacttcctgactattatctgacc
attaaaaagcccatggacatggaaaaaattcgaagtcacatgatggccaacaaataccaa
gatatagactccatggttgaagacttcgtcatgatgtttaacaatgcctgtacatacaat
gagcctgagtctttgatctacaaagatgcccttgtcctgcacaaagtcctgcttgaaact
cggagagacctagagggagatgaagactctcatgtcccaaatgtgaccttgctaattcaa
gagcttatccacaatctttttgtgtcagtcatgagtcatcaggatgatgagggaagatgt
tatagtgattccttagcataaattccggctgtggatcccaactttccaaacaaacctcct
cttacttttgacataattaggaagaatgttgaaaataatcgctaccggcggctcgattta
tttcaagaacatatgtttgaagtattggaaagggcaagaaggatgaatcggacagattcc
gaaatatacgaagatgcagtagaacttcaacagttttttattaaaattcgtgatgaactt
tgcaaaaatggagagatccttctttcaccagcactcagctatactacaaagcatttgcat
aatgatgtggagaaagagaaaaaggaaaaattaccaaaagaaatagaggaagataaacta
aaacgagaagaagaaaaaagagaggctgaaaagagtgaagattcctcaggttctgcaggt
ctctcaggcttacatcgcacatacagccaagactgcagctttaagaacagcatgtaccat
gttggagattatgtctatgtggagcctgcagaagccaacctacaaccacatatagtctgt
attgaaaggctgtgggaagattctgctggcgaaaaatggttatatggctgttggttttat
cggccaaatgaaacattccatctggctacacgaaaatttctagaaaaagaagtttttaag
agtgactattacaataaagttcccgttagcaaaattctgggaaaatgtgtggtcatgttt
gtcaaggaatactttaaattatgcccagaaaactttcgtgatgaggatgtttttgtctgt
gaatcacggtattctgccaagaccaaatcttttaagaaaattaaactgtggaccatgccc
atcagctcagttagatttgttcctcgagatgtacccttgcctgtggtccgagtggcctct
gtatttgcaaatgcagacaaaggggatgatgagaagaacacagacaactcagaggacagt
cgaaccgaagaaagttttaacttggaaaaggaaaaagaagatgtccctgtggaaatgtca
aacggtgaaccaggttgccactactttgagcagctccgttacaatgacatgtggctgaag
gttggcgactgtgtcttcatcaagtcccatggcctggtgcgccctcgcgtgggcagaatt
gaaaaagtatgggtccgagatggagctgcatatttttatggccccatcttcattcaccca
gaagagacggaacatgagcccacaaaaatgttctacaaaaaagaagtatttctgagtaat
ctggaagagacctgccccatgacatgtattctgggaaagtgttctgtgttgtcattcaag
gacttcctctcctgcaggccaactgaaattccagaaaatgacgttctgctttgtgagagc
cgctacaacgagagtgacaagcagatgaagaagttcaagggactaaagaggttttcactc
tctgctaaagtggtagatgatgaaatttattacttcagaaaaccaattgttcctcagaag
gagccctcacctttgttggaaaagaagatccagttactagaagctaaatttgctgagtta
gaaggtggagatgatgatatcgaagagatgggagaagaggatagtgaagtcattgagcct
ccctctctacctcaacttcagactcccctgaccagtgagctggatctcatgccctacaca
cccccacagtctaccccaaagtctgccaaaggcagtgcaaagaaagaaggctccaaacgg
aaaatcaacatgagtggctacatcctgttcagcagtgagatgagagctgtaattaaggcc
cagcatccagactactcttttggggaactcagccgactagtagggacagaatggagaaac
ctcgagacagccaagaaagcagaatatgaagagcgggcagctaaagttgctgagcagcag
gagagagagcgagcagcacagcaacagcagccgagtgcttctccccgagcaggcacccct
gtgggggctctcatgggggtggtgccaccaccaacaccaatggggatgctcaatcagcag
ttgacacctgttgcaggcatgatgggtggctatccgccaggccttccacctttgcagggc
ccagttgatggccttgttagcatgggcagcatgcagccacttcaccctggggggcctcca
ccccaccatcttccgccaggtgtgcccggcctcccgggcatcccaccaccgggggtgatg
aaccaaggagtgacccctatggtagggactccagcaccaggcggaagtccatatggacag
caggtaggagttttggggcctccagggcagcaagcaccacctccatatcctggcccacat
ccagctggcccccctgtcatacagcagccaacaacacccatgtttgtggctcccccacca
aagacccaacggcttctccactcagaggcctacctgaaatacatcgaaggactcagtgct
gagtccagcagcattagcaagtgggaccagactctggcagctcgaagacgtgatgtccat
ttgtcaaaagaacaggaaagccgcctaccctctcactggctgaaaagtaaaggggcccac
accaccatggcagatgccctctggcgccttcgggatttgatgctccgagacaccctcaac
attcgccaagcatacaatctagaaaacctataa
DBGET
integrated database retrieval system
