Pteropus alecto (black flying fox): 102897612
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Entry
102897612 CDS
T02993
Symbol
SPG11
Name
(RefSeq) spatacsin isoform X2
KO
K19026
spatacsin
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale05014
Amyotrophic lateral sclerosis
pale05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102897612 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
102897612 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pale03400
]
102897612 (SPG11)
DNA repair and recombination proteins [BR:
pale03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102897612 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
DUF6308
Rop
PUB2_N
Motif
Other DBs
NCBI-GeneID:
102897612
NCBI-ProteinID:
XP_006920480
LinkDB
All DBs
Position
Unknown
AA seq
2445 aa
AA seq
DB search
MAAEKWSGSAAAGSSCNHKAMERVLPMLLVPVPAEATGRLGSRAQLHREQEVLGSLTAAG
SLQVLSLAPGGRGGGGCCLDGPFRHFVWEDCHNSGTPTDKPRLLALSENYELLIYEFNLK
DGRCDGTILYSYTEETLQKLIEDQNISISLLSLRILSFHNNTSLLFINKSIILRIIFPER
DAEIRVLNCFTLPLPTQAVDRIIDTQLCRGILFVLSSLGWIYIFDMVDGTHVAHVDLTLH
QEDMCNEQQQQPANISSFISLKVSQDLDVVVIVSSSNSAVALNLNLYFRQHPGHILRERT
LQDIPIEGPKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLSSLNKTIKSSKLEFSHCVP
WFQDILHLEFPESLNHSMNAPSWPFIPQDIMHSQYNFPQKDHTKTSDPGRAWKMMHISEQ
EEPIELRCVSVTGFTALFTWAVERMGCTIVLWDLETQGMQCFFLGQKCIPVDNSGDQQLC
LVLTENGLSLILFGLSQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQ
LDTVDFFLKSKENLLNPSSKSSVSDQFDHFPSHLYLRNVEELTPALDLLCSAIRESDSET
QSKNFSEQLLNLTLSFLNKQIKEIFIHHEELDEHLQKGVNILTSYINELRTFMIKFPWKL
TDAIEEYDVNENVPKVKESNIWEKFSIEDVIANAILNNKIPEAQTFFRINSHSAQRLEEL
IRIGLDLVFDNLKKNNVKEASELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKNY
FSEKENGTIDFVHQVEKFYSEYLQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDQKDK
LNKQNHRIALNWAQWWNQLTQESILLPRINPEAYKSCSPEALWRYLTARHDWLSIISWIG
EFQTHNSYASLQQNKWPPLTVDVIDQNTCCNDNMRNKILDDLARNGIFLTSELEDFELFL
LRLNHIGGVMQDTLPVQNYRSKEGWDFHSRFILYCLEHNLQYLLYVFLDYYKLSPSNCPF
LEKKELHEAHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHT
LLALATTMYAPGGVSQVVQNEENESCLKKVDPQLLKMALAPYPKLKTALFPQYTAPSVLP
PDITLYHLIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFAY
YLHHGRPSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSSCIPSIGAACVCFLELL
GLNSLKLRVDMKVANIILSYKCRNEDAQYSFIRESLAEKLSKLAADEKATIEELLILLEE
GIWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSTSYLRECAKANDWLQFIIHSQIH
NYHPEEVKSLLQYFSPVLQDHLKLAFENLSSVSNSRMDNDQVCIKPPKELQRSKEEMTDF
FEILLQCSEEPHSWCWLLAEAVKQQAPVLSVLASCLQDASAIPCLCVWIITSVEDSVAAE
AMGHIQGSVEGHTWDLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLMMEMYELCMF
FKNYKEAEAKLLEFQKNLETLETAAASVHTVIPFPWLKEQVCFLLKLMLQQCRTQYELGK
LLQLFVGIEHLFSHGPDVKKLYVLSQILKDTSIAINRVIITTYSLENFQHECRSVLEKLE
TNGQFALARRVAELAELPVDNLVIEEVIQEMQTLKHIDQWSLKQARIDFWKKCHETFKKN
SISSKAATSFFSAQALVACEYPTEEGPSSIEERHLLLTLAGHWLAQEDLVPVEKLEELEK
QIWLCRITRHTLRGHQEEMEPRFSQQISISGELSFDSLASEFSFSKLAALNTSKYLELNG
LPSKETCEDRLDWKEQKSLNFLIGRLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALAS
GEASVDDLHPEIHALLQSAELLEEEEEPHIPLRKVSSTSSLDSQSFVMLPHRDEVVTNLE
TLTRKCLHGKNYCRQVLCLYELSKELGCSYTDVATRDGEAMLRAILASQQPNRCKQAQAF
ISTQGLEPDTVAELVAEEVTRELLSPSEGAGHKQMSTPAEESQTFLQLTTLCQDRTLVGM
KLLDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLKAARLLTDNHLAPNEEYGL
VVRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKH
NMIALCFSMCREIGENHEAAACIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAES
YAKDSCVRQALHCHRLTKLLTLQIHFLNTGQNTMLINLGRHRLMDCIMALPRFYQASIVA
EAYDFVPDWAEILYQQVILKGDFNYLEEFKQQKLLNSSIFEEISKKYKQHQPTDTVVKNL
KKLLTYCEDVYLYYKLAYEHKFYDVVNVLLKDPQTGCCLKDMLAG
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagagaagtggtccggaagtgctgccgcaggcagtagttgcaaccataaagcc
atggagcgggttttacctatgttgttggtgccggtccccgccgaggcaacggggcggctg
ggatcccgggcgcagttgcacagagagcaggaggttctggggagcctgacggctgcaggc
agccttcaagtgctttccttggcgccaggcggccggggcgggggtggctgctgcctcgac
ggcccctttcggcactttgtgtgggaggattgtcataacagcggcacaccaacagacaag
cccagactgctcgctcttagtgaaaattacgaactgctcatctatgaatttaatttgaaa
gatggacgatgtgatggaaccattttatatagctatactgaggagacattgcaaaagctc
attgaagatcaaaatatcagtatttccttattatctttgagaattctgtcatttcacaat
aacacatcattattgttcatcaataaaagtatcatcctacgcattatattccctgaaaga
gatgctgagattagagtactcaactgtttcacattacccttgcctacacaggcagtggac
agaattattgacacgcagctctgcagaggaattctttttgttttgagtagtttaggttgg
atctacatatttgacatggtggatggtacacatgtagctcatgtggatttaacacttcac
caagaagatatgtgtaatgagcagcaacagcagccagccaatatttcttcctttatttca
ctgaaagtgtctcaagacctagatgttgtagtgattgtcagctcctccaactctgcagtt
gctctcaacttaaatctatatttcaggcaacacccaggacacatactgcgtgaaagaact
ctacaagacattcctatcgaaggccctaagggaatagatgaagatgatcctgttaattct
gactacaacatgaaactgaccaagttttccttccaagtggataggtcttggaaagcccag
ctatcatcattgaataagacaataaagagctccaaactggagttttcccattgcgttcca
tggttccaggatattttgcatttggagtttcctgaatctcttaaccacagtatgaatgcg
ccaagctggcctttcattccacaggacataatgcacagtcagtataattttccacagaaa
gatcatactaagaccagtgatccaggaagagcatggaaaatgatgcacatcagtgaacaa
gaggaacccatcgagcttagatgtgtgtctgtgacaggattcactgcactgtttacttgg
gcagtggaaaggatgggctgcaccattgtcctttgggatttggaaacccagggcatgcag
tgctttttccttggccagaagtgtattcctgtagacaacagcggagaccagcaattgtgc
cttgttttgacagaaaatggactgtctctgattttgtttggtttgtctcaagaagagttt
ttaaatagactaatgatccatggaagtgccagcactgtggactctctttgccatctcaat
ggttggggaaggtgctcaatccccatacatgccctagaggccggtatagaaaatcgtcag
ctagacacagtagatttctttttgaagagcaaggaaaatcttttgaatccatcctcaaaa
tcatctgtatctgatcagtttgatcactttccatcccatttatatttaagaaatgtggaa
gagctgacaccagcattggatttactttgctcagcaattagagaaagtgattctgaaacc
cagagcaaaaacttctcagaacaattgcttaatcttacactgtccttccttaacaaacaa
ataaaggagatttttattcatcatgaagagctagatgaacatctacagaaaggagtgaac
attttgaccagctacattaatgaacttcgaactttcatgataaagtttccttggaagcta
acagatgctatagaggaatatgatgtaaatgaaaatgtcccaaaagtaaaggagagcaat
atctgggagaaattcagcattgaggacgttattgccaatgccattttaaacaacaaaata
ccagaggcacagactttcttcaggattaatagtcattctgctcaaagactcgaggagctg
attagaataggcttagatttggtctttgacaatttgaaaaagaacaatgtaaaggaagcc
tctgaacttttaaagaatatgggctttgatgtaaaagaccagttgctcaagatatgcttc
tatacaactgataaaaatatacgggattttttggttgaaattttaaaagaaaaaaattat
ttttctgaaaaagagaatggaactatagacttcgtgcatcaagttgagaagttttattca
gaatatttgcaagaaaatatgcagatccagtcatttcccaggtattggataaaggaacaa
gattttttcaagcacaagtctgttttggactcattcctgaaatatgatcaaaaagataaa
cttaacaagcagaaccatagaattgcgttaaattgggcccagtggtggaatcagctaaca
caagaatccatccttctccccaggataaatccagaagcatacaaatcatgttctcctgaa
gccctctggagataccttacagctcgccatgactggttaagcattatctcatggattgga
gaatttcagacccataatagttatgcctcacttcagcaaaacaaatggccccctctgact
gttgatgttattgatcagaacacttgctgcaacgataacatgaggaataaaattttagat
gacctggccaggaatgggatttttcttacatctgaactagaagactttgaactcttcctc
ctaagactgaaccatattgggggtgtgatgcaagacaccctccctgttcaaaactacagg
tccaaagaaggttgggatttccattctcgcttcattctctattgtttggaacacaatctg
cagtatcttctttacgtctttcttgactattacaaacttagcccttcaaattgccccttt
ttggaaaaaaaagaattacatgaagctcacccttggtttgaatttttagtgcaatgtcga
caggtttccagtaacttaacagatcctaaactcatcttccaggctagccttgcaaatgcg
cagatactgattcccagtaaccaggccagtgtaagcagtatgctgttggagggacatacc
ctcctcgccctcgctaccacaatgtatgctcctgggggtgtcagccaggttgttcagaat
gaagaaaatgagagctgtttgaagaaagtagatccccagctactgaagatggcattagct
ccttatcctaagctaaaaacggctctcttcccacagtatactgcccctagtgtcctgcca
cctgatattacactctaccaccttattcagtcattatcgccctttgatcccagcagattg
tttggctggcaatctgccaacacactagctataggagatgcatggagtcatctcccacat
ttctctagccctgacctggttaataaatatgctatagtggaacgtctgaattttgcttat
tatttacatcacggacggccatcatttgcatttggtacttttctggtccaggaattaact
aagagcaagacacccaaacagctgatccagcaagtaggcaatgaagcttatgttttaggc
ctctcctcctcctgcataccttcaataggagctgcctgtgtttgtttcttagaattgctt
ggcctcaacagcctcaagctcagagttgatatgaaagtggccaatataattctgagctac
aaatgtagaaatgaagatgctcagtacagctttatcagagaatctctagctgaaaaacta
tctaaactggctgcagatgaaaaggcaaccatagaagaattgctcattctcttagaagaa
ggtatatggaacagcattcagcaacaggaaataaagaggttatccagtgaatctagcagc
caatgggcattagtggtacagttctgcaggctccacaatatgaaactgagcacatcttac
cttagagaatgtgccaaagcaaatgattggttacagttcattattcacagccagatccat
aattaccatccagaggaggtgaaatcccttctccaatattttagccctgtccttcaagac
catttaaagctggcttttgagaacttgtcttcagtgtccaactccagaatggacaatgat
caagtctgcatcaagccccccaaggaactccagagaagcaaagaagagatgactgatttt
ttcgaaattctgcttcagtgctcagaggagccacactcctggtgctggctcctggctgaa
gcagtgaaacaacaggcccctgttcttagtgttctggcctcatgtctccaggatgccagt
gctattccctgtctctgtgtttggatcatcacttctgtggaggacagtgttgcagctgaa
gcaatgggacacattcaaggctcagtggagggccacacttgggaccttgaggacctctca
gtcatctggagaactttattaacaaggcagaagagcaaaactctcatcagaggtttccaa
cttttctttaaggattccccattactattgatgatggagatgtatgaactgtgtatgttc
ttcaagaattataaggaagccgaagccaaattactggagttccagaagaacctcgaaact
cttgaaacagcagccgcaagtgtccacactgtcatccctttcccatggctgaaggagcag
gtgtgttttcttttgaagctaatgctacaacagtgtaggacccagtatgagctggggaag
cttttacagctgtttgttggaatagagcatctcttctctcatggtccagatgtaaagaaa
ctgtatgtccttagccagattttgaaggatacatccatagccattaatcgtgtaattata
accacctatagccttgagaattttcagcacgaatgtagatctgttttggaaaaactggag
acaaatggacaatttgctttagccaggagagtagcagaattagctgagttacctgtggac
aacttggttattgaagaggtaatacaggaaatgcagaccttaaagcacattgaccagtgg
tccctgaaacaagcaagaattgacttctggaaaaaatgccatgagacttttaagaaaaat
tccatttcaagcaaagcagctacttcctttttctcagcccaggcccttgtggcctgtgag
tacccaactgaggagggaccgagcagcattgaggagcgccatctgctgctcaccctggca
ggacactggcttgctcaggaggaccttgtacctgtggagaagttggaggagctggagaag
cagatctggctctgccgtatcacccggcacaccctcagaggacaccaggaagaaatggag
cccagattttctcaacagatctcaattagtggtgagctttcctttgatagcttagccagt
gagttttcattctccaagttggctgctctgaacacatcaaaatatttagaacttaatggc
cttccatccaaagagacttgtgaggacagactggattggaaggagcagaagtcgctaaac
tttttgattgggcgcctgttggatgatggctgtgtgcatgaagcaagtagagtatgccgg
tattttcatttctataaccaagatgttgccttggtattgcactgcagagcactggcttca
ggagaagctagtgtggatgacctccatccagaaatccatgccctcctacagagtgctgag
ctgctggaggaagaagaagaacctcacattcctctaaggaaagtctcaagcacttcaagt
ttggatagtcagtcatttgtgatgctgccccacagagatgaagtggtgactaatctggaa
actctgacaagaaaatgcctccatgggaagaactactgccggcaggttctctgtctgtat
gaactttccaaggagttgggctgttcctacacagacgttgccacccgggatggtgaggcc
atgctccgagcaatcttggcctctcagcaacccaacagatgcaagcaagcccaagccttc
atcagcacccaaggccttgagccagacacggtggctgaacttgtggccgaagaggtgacc
cgggagctgctctcaccatcagagggagcaggacataagcagatgtctaccccagcagag
gaaagccagacatttcttcagctgaccactttgtgtcaagatcgcacgttggtaggcatg
aagttgttggataagatttcctccgttccccatggggaactgtcttgcactacagagctg
ctaatcctggcccatcactgcttcacgctgacatgccacatggagggcatcatccgagtc
ctgaaggctgcccggctgctcacagacaaccacttggcccccaacgaggagtatgggcta
gtggtgcgtcttctcactggcattggaaggtacaacgagatgacatacatatttgatttg
ctgcataaaaaacactactttgaagtgctgatgaggaagaagttggatccaagtggtacc
ctgaagacggccctactcgactacatcaaacgttgccgccctggggacagtgagaagcac
aacatgattgccctgtgcttcagcatgtgcagggagatcggggagaaccatgaggcagct
gcttgcatccaactgaaactgattgagtctcagccttgggaggacagcctcaaggacggg
caccaactgaagcagctgctgttaaaagccctcactctgatgctggatgcagcagaaagt
tatgccaaggactcctgcgtgcgccaggccctgcactgtcaccggctcaccaagttgcta
acactgcagattcactttctgaacactggccaaaacacaatgctcatcaacctgggccgc
cacaggctgatggactgcatcatggccctacctcggttctaccaggcttctattgtagct
gaggcctatgactttgttcctgattgggctgaaattctataccaacaagtgatacttaaa
ggggactttaattacttggaagaatttaagcagcaaaagttattaaattccagtatattt
gaagagatttcaaaaaaatataaacaacatcaacctactgacacagttgtgaaaaacctg
aagaagttacttacatattgtgaagatgtctacttatattacaagctggcatacgaacac
aaattttatgatgttgtaaatgtgcttctgaaggatccacagacaggttgctgtctaaag
gacatgctagcaggttag
DBGET
integrated database retrieval system
