Parasphingopyxis algicola: HFP57_11485
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Entry
HFP57_11485 CDS
T06669
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
palg
Parasphingopyxis algicola
Pathway
palg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HFP57_11485 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palg03400
]
HFP57_11485 (mutS)
DNA repair and recombination proteins [BR:
palg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HFP57_11485 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QLC26940
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Position
complement(2327082..2329670)
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AA seq
862 aa
AA seq
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MMAQYLALKESVPDCLLFYRMGDFFELFFEDAKAAAATLDIALTARGEHDGEPIPMCGVP
AHSHEAYLARLIKAGHRVAIADQTETPEQAKKRAGSKALVGRAIIRVVTAGTLTEETLLD
AKSENWLVAVAETVGKLGIAAADISTGRFTLATAEPDMLDAELARLSAAELIVPEGFANV
PEHAQICPKTDFGSIGAEKRLKALFGVATLDGFGDFDRAELAAAGGLLAYLETAGQGDLP
FLQPPRRHRTGDHMLIDAATRESLELTQAVGGGRSGSLLGCIDQSVTGAGARLLAADISA
PLTSVAAIEARLDLVRLLEADAGRRESLRAALKALPDIGRALGRLVAARGTPRDLGLLRD
GLGAARELHMDLSQIEEPPKLLAELLPALTGHGALTDHLSRALVPSPPIDIAKGGYIAEG
YDAALDDLRETAGAGRKAIAGLEARYRETTGIASLKVKHNNVLGYHIEVPSRHADALMGE
ESGFTHRQTLAGVVRFNAPDLHEEAQRVMQAGAHALAAEAAHLEELIATTLADKDRIAAT
ADALARLDVAAALAEQAALCGWTRPRLAGHPCFQVEGGRHPVVERAVEQQGERFVANDCR
LSPDERLWLVTGPNMGGKSTFLRQNALIAVLAQAGSYVPAASAELGIVDKLFSRVGASDN
LARGRSTFMVEMVETAAILAQATENSLVILDEVGRGTSTYDGLAIAWAVVEAVHDVNRCR
CLFATHYHELTRLAERLDALSLHHVRAREWKGDLVLLHELADGPADRSYGLAVAKLAGLP
KDTVARAKSVLAKLEAGRASTGGLAAGLDDLPLFSADVAQEENRADPLRETLEAVHADDL
SPREALDFVYRLKRLADEGDDA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcaatatctggcgctcaaggagagcgtacccgattgtctgctcttctaccgc
atgggcgatttcttcgagctgtttttcgaagacgccaaggctgccgccgccaccctcgat
atcgcattgacggcgcgcggcgaacatgatggcgaaccgatcccgatgtgcggcgtgccc
gcgcacagccatgaggcgtatctcgcgcggctgatcaaggcgggtcatcgcgtcgcgatc
gccgaccagacggagactcccgaacaggcgaagaagcgggccggttcgaaggcgctggtc
gggcgggcgattatccgggtggtcacggccgggaccctgaccgaggaaacgctgctcgat
gccaaatcggagaactggctggtcgctgtcgcggagacggtgggaaagctggggattgcc
gcggcggatatctcgaccgggcgcttcacgctggctaccgccgaacccgatatgctcgac
gctgagctggcccggctgtccgccgccgaactgatcgtgccggaggggttcgcaaacgtg
ccggagcatgcgcagatctgtccgaaaaccgatttcggcagcatcggggcggagaagcgg
ttgaaggccttgttcggtgtggcgacgctcgacggattcggcgatttcgaccgggccgag
ctggcggcggcaggcgggttgctcgcctatctcgagaccgccgggcagggcgatttgccc
ttcctccagccgccgcgccgtcaccggaccggcgatcatatgctgatcgatgccgcgacg
cgcgaaagcctcgagctgacgcaggctgtcggcggcggccgcagcggcagcctgctcggc
tgcatcgatcagagcgtgaccggggccggtgcgcggctcctcgccgccgatatctccgcg
ccgctgacatcggttgccgcgatcgaggcgcggctcgatctcgtccggctgttggaagcc
gatgcaggccggcgcgaaagcctgcgcgctgccctgaaggcgctgcccgatatcggtcgg
gcgctggggcggctggtcgctgcgcgcggcacgccgcgcgatctgggattgttgcgggac
ggactcggtgcggcgcgtgagctccatatggatttgtcccagatagaggagccgccgaaa
ctgctggccgaattactgccggcgctgaccgggcacggggcgctcaccgatcatctctcc
cgcgcacttgtaccatcgccgccgatcgatatcgccaagggcggctatatcgccgaaggc
tatgacgcagcgctcgatgacctccgggaaacggccggggcgggccgcaaggcgatcgcc
gggctcgaggcgcgctatcgcgagacgacggggattgcgagcctcaaggtgaagcacaac
aacgtgctcggttatcatatcgaggtgccctcgcggcatgccgacgcgctgatgggcgag
gagtccggtttcacccaccgccagacgctggccggggtcgtgcgtttcaacgctccggat
ctgcacgaggaagcgcagcgtgtcatgcaggcgggtgcccatgctctggccgcggaggcc
gcgcatctcgaggagctgatcgcgacgacccttgcggacaaggatcgcatcgccgcgacc
gccgatgcgctggcccggctcgacgtcgcagccgccctcgctgaacaggcggcgctgtgc
ggctggacccgtcccaggctcgctggccatccctgtttccaggtcgagggcggccgccac
ccggtcgtcgagcgggcggtcgagcaacagggcgaacgcttcgtcgcgaatgactgcagg
ctttctccggacgagcggctctggctcgttaccggccccaatatgggcggcaaatcgacc
tttctgcgccagaatgcgctgatcgcggtactcgcccaggcgggcagctacgtaccggcc
gcttcggccgaactcggcatcgtcgacaagctcttttcgcgtgtcggcgcgtcggacaat
ctcgcgcgcggccgttcgaccttcatggtcgagatggtagagaccgccgcaatcctcgcg
caagcgacagaaaacagccttgtgatacttgacgaggtcgggcgcgggacgtcgacctat
gacgggctcgccattgcctgggccgtcgtcgaggcggtccacgacgtgaaccggtgccgc
tgcctcttcgccacccattatcacgagctgacccggctcgccgaacggctcgacgcgctg
tccctccaccatgttcgcgcccgcgaatggaaaggcgatctggtgctgctccacgaactg
gccgacgggccggccgatcgcagctacggccttgccgtcgccaagctggccggtttgccc
aaggacaccgtcgcgcgggccaagtcggtgctcgccaagctcgaggccgggcgcgcctcg
accggcgggctggcggccgggctcgacgatctgccgctgttttccgccgatgtcgcgcag
gaggagaaccgcgccgatccgctgcgcgagacgctggaggcggtccatgccgacgatctg
agcccgcgcgaggcgctggacttcgtctaccgcctcaaacggctggcggacgagggcgac
gacgcctag
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