Pendulispora albinea: LZC94_03035
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Entry
LZC94_03035 CDS
T10974
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K12146
hydrogenase-4 transcriptional activator
Organism
palj Pendulispora albinea
Brite
KEGG Orthology (KO) [BR:
palj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
palj03000
]
LZC94_03035
Transcription factors [BR:
palj03000
]
Prokaryotic type
Helix-turn-helix
Other families
LZC94_03035
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
HTH_8
AAA_2
MCM
AAA_22
AAA
AAA_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WXB16256
LinkDB
All DBs
Position
complement(740334..741776)
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AA seq
480 aa
AA seq
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MSSSSSTSMALLTDLVEALGFRHTERTWARATYEVLSRYVAVRTVEIVLFGPAGSRKILP
SATTSAVVALRPSEESWFRDAMLRGARLLDTKRAAAMAIVPIADSGGALGCATIALERES
ELLTRALLESMGRVLRSTLRQIHAIARVAELSRRVHTQTRQLREDLRQLLPSAVVAANPR
MQRIFAEIVPLVARQDTTVLICGESGTGKEVVARRIHELSPRSKRPFIRINCGAIPSGLV
ESTLFGHEKGAFTGATERRAGVFERAHMGTLLLDEVGELPPSAQVKLLRVIETGEAERVG
GNRTIPLDVRILAATHRDLHAMVDAQAFRADLLYRLDVFPITIPPLRERKDELEALTAHI
LARLARRFGRSSPPLSRKSIARLRSYEWPGNVRELENVLERSLLLSTGASLEIVLPDRAL
KRGSVSTFQAAAKRCIEDALALTEGRIYGPNGAAAVLGIKPTTLQSKMKRLGMARRAIAR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcgtcctcttccacttcgatggcgctgctcaccgatctcgtggaggcgctcggc
ttccgccacacggagaggacgtgggcgcgtgcgacctacgaggtgctgtcgcgctatgtc
gcggtgcgaaccgtggagatcgtcctgttcggccctgcgggctcgcgaaagatcctgcca
tctgccacgacgagcgcggtcgtggcgcttcgcccgagcgaggagtcgtggtttcgcgat
gccatgcttcgcggagcgcggctgctcgacacgaagcgcgccgccgcgatggccatcgtg
ccgatcgccgattcgggaggagcgctcgggtgcgcaaccatcgctctggaacgggagtcg
gagctgctcacccgcgcgctgttggagtcgatggggcgcgtccttcgctccaccttacgg
caaattcacgccatcgcgcgggtcgccgagctatcccggcgcgtccacacacagactcgc
cagctgcgcgaagatctgcggcagctcttgccgtcggcggtcgtcgccgccaatccgcgc
atgcagcgcatcttcgccgagatcgtgcccctcgtggcccggcaggacacgacggtgctc
atttgcggggagtccggcaccggcaaagaggtggtggcgcgccgcatccatgaattgtcg
ccgcgttcgaagcggccgttcatccgaatcaactgcggcgcgattccatcggggctcgtg
gagagcacgctgttcggtcacgagaagggagcttttacgggggccaccgagcgacgcgcc
ggggtattcgagcgcgcgcacatgggcaccttgctcttggacgaagtgggcgagcttccg
ccctccgcgcaggtgaagctgctgcgcgtgatcgagaccggtgaagccgagagggtcggc
ggcaaccgcacgatcccactcgacgttcgaatccttgccgccacccatcgcgatctgcac
gcgatggtcgatgcccaagcttttcgcgcagaccttctttatcgtttggacgtattcccc
atcacgatacctccgctccgcgaacgaaaagacgagctcgaggcgttgaccgcgcacatc
ctcgcccgcctcgcgcgtcgattcgggcgctcatcacccccgctatcgcgcaaatccatc
gcgcgtttacggagctacgagtggccgggcaacgttcgcgagctcgagaacgtgctggag
cgaagcctgctgctcagcacgggggcgtcgctcgaaatcgtgctcccggaccgagcgctg
aaacgtggctccgtatccacctttcaagccgcggccaagcgatgcatcgaagatgcgctc
gcgctcaccgaagggcgcatttatggcccgaacggcgctgcggccgtacttgggatcaaa
cctacgaccttgcagagcaagatgaaacggctcgggatggcccgacgagcaatcgcgcgc
tga
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