Paenibacillus algicola: E6C60_3222
Help
Entry
E6C60_3222 CDS
T07807
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
palo
Paenibacillus algicola
Pathway
palo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E6C60_3222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palo03019
]
E6C60_3222
03400 DNA repair and recombination proteins [BR:
palo03400
]
E6C60_3222
Enzymes [BR:
palo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C60_3222
Messenger RNA biogenesis [BR:
palo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E6C60_3222
DNA repair and recombination proteins [BR:
palo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E6C60_3222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
Helicase_Sgs1
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCT03933
UniProt:
A0A4P8XNC2
LinkDB
All DBs
Position
complement(3380918..3382765)
Genome browser
AA seq
615 aa
AA seq
DB search
MIHKQSIDFHTAKEYLQKYYGYPDFREGQKKIVASLLEGSDTLGIMPTGGGKSICYQIPA
LIYQGLTLVVSPLISLMKDQVDALQSAGIAAAYINSTLSGREVNDRIRAAKARELKLLYV
APERLELDWFREEMGGLDISCVAVDEAHCVSQWGHDFRTSYLSVAPFVRGLPRRPIVAAF
TATATPEVMEDIQRLLQLQTPQVFVTGLGRDNLHMSVLRGESKKEFVLDYAASHAHESGI
VYAATRKEVDDLCQRLQLKGLAAGRYHAGMSDDERASSQEAFLYDDIRVIVATNAFGMGI
DKSNVRYVIHYNMPKNMESYIQEAGRAGRDGEPSQCILLFSAQDIMTQKFLIEQNPQDGE
RKHNEYRKLQQMIDYCYTTRCLRSAMLDYFGEEHGDERCGTCSSCTDDRELVDITVDAQK
IFSCIHRMRERFGVSMIASVLKGSRAKKLLEYGFDRLPTYGVMNGRTEKEIAESINVLIS
EGYLALSEGQYPVVRLQSLAAEVLRGQREVTQRVPRPSKAVSQRRSARDTSPSAVNETVF
EQLRLIRRELASREHVPSYIIFNDATLREMSVICPQTEQDMLQVKGVGEVKYRKYGLPFL
QFFQSQGADGGSDEY
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
ttgatccataaacaatctattgattttcatacagcgaaggagtatctgcagaaatattac
gggtatcctgattttcgtgaaggccagaagaagattgtcgccagcctgctggaaggcagt
gacacgctcggcattatgccgaccggaggcggcaagtccatctgctatcagattccggcg
cttatttatcagggcctgactctcgtggtatcgccgctcatttccctgatgaaggatcag
gtggatgcgctgcaaagcgccggcattgctgcagcatatatcaatagcacattgagcggc
cgtgaggttaacgaccggatccgtgcagccaaggcaagagagctgaagctgctctatgta
gctccggagcgtctggagctggactggttccgcgaggaaatggggggcctggacatctcc
tgtgtagcggtggacgaagctcactgtgtatctcaatggggccatgatttccggacaagc
tatttgtctgtggcaccgttcgtgcggggactgccaagacgtcccattgtcgccgcattt
accgcgaccgcaacaccggaggtcatggaggacattcagcgactgctgcagcttcagact
ccgcaggtattcgttaccggacttggtcgggacaacctgcatatgtccgttctccgcggt
gagagcaagaaggagttcgtgctggattatgcggcctcgcatgctcatgagtcgggcatt
gtatatgccgcaacccgcaaagaggtcgatgatctatgtcagcggcttcagctgaaaggc
ttggccgcaggacggtatcatgcagggatgagcgatgacgagcgggcgtcgagccaggaa
gcgtttctgtatgacgacattcgcgtgattgtcgctacgaatgcattcggcatggggatt
gataaatctaacgtccgctatgtcattcactacaatatgcccaagaacatggagtcctac
attcaagaggcaggccgcgcgggccgggacggagagccgagccagtgcatcctgctgttt
agcgcccaggacattatgacccaaaaatttctgatcgagcagaatccccaggatggggag
cgcaagcataatgaataccgcaagctgcagcagatgatcgattattgctacacgacccgc
tgcctgcgcagcgcgatgctggattacttcggagaagagcacggcgacgagcgctgcggc
acatgcagctcctgcacggatgatcgcgagcttgttgatattacggtggatgcgcagaag
attttttcttgtatccacagaatgcgcgagcgcttcggggtgtcgatgattgcctccgtg
ctgaagggctcccgtgccaaaaagctgctggagtacggctttgaccgcctgcctacctac
ggcgttatgaatggccggacagagaaggagattgccgaaagtatcaatgtactgatctcg
gaaggctatctggccctctcggaaggccagtatccggtcgtgaggctgcagagccttgcc
gctgaggtgctgcgcggacagcgcgaggttacgcagcgggtgccgcggccatccaaggcc
gtctcccagcgccggagcgcgagggatacctctccgtctgctgtgaacgagacggtgttc
gagcagctgcgcctgatccggcgggagctggcgagtcgggagcatgttccctcttatatt
atttttaatgatgccacgctgcgcgagatgagcgtgatttgtccccagacggagcaggat
atgctccaggtcaaaggggtcggagaagtgaaataccggaaatacggcctgccattcctg
cagttttttcaaagccaaggggcagacggcggttcggatgaatactaa
DBGET
integrated database retrieval system
