Populus alba (white poplar): 118027916
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Entry
118027916 CDS
T07314
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118027916
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118027916
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118027916
NCBI-ProteinID:
XP_034887308
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Position
1:complement(681892..683490)
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AA seq
354 aa
AA seq
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MNVIDQCWRMNPNWQRSRQHLATCSVGFAGKMTNNVGKNVLWYKVTDPSDDPVNPRQGTL
RYGATMITGKVWITFEKNMDIKLEKPLLISSHTAIDGRGVDVSIEGIGCLVVYKATDVII
HGLKIHHCKAQGPSSVMGPDGKLMPLGQMDGDAIRLVTASKVWIDHNTLYSCQDGLLDVT
RGSTFVTVSNNWFRDQDKVMLLGHDDGYLRDKNMKVTVAFNHFGPNCNQRMPRVRHGYAH
VANNLYLGWEQYAIGGSMNPSIKSESNHFIAPAQSGKKEVTWRNTEMGAKGKPWNFYSVG
DMFTNGASFVQTGRRGTAKPNYNKEQKFKVGSANSVQSMTSSAGALTCTRTLTC
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcattgatcaatgctggagaatgaatccgaattggcagagaagccgacaacat
ctggctacttgctctgtggggtttgcagggaaaatgaccaacaatgttgggaaaaatgtt
ttatggtataaggtcaccgatcctagtgacgaccctgtgaatcccagacaagggacatta
agatatggagctaccatgatcacaggaaaagtctggatcacttttgagaagaacatggac
attaaacttgagaaacctcttcttattagcagccatactgccattgatggtcgtggcgtt
gatgtcagcattgaaggcatcggatgcctcgtggtgtacaaggcaaccgacgtgatcatc
catggcctaaagattcaccattgcaaggcacagggacctagctcagtcatgggaccggat
gggaaactaatgccgttaggtcagatggatggtgatgccataaggctggtcactgcatct
aaggtttggatagaccacaatacattatactcgtgccaggatggccttcttgatgtcact
cgtggatctacatttgttactgtctctaacaattggtttagagaccaagacaaggttatg
cttcttggacatgatgatgggtatttgagagacaagaacatgaaggtcacggttgcattc
aatcattttggtcctaattgcaaccaaagaatgccaagggttcgccatggatatgcacat
gtagctaacaatctttacctgggttgggaacaatatgcaattggaggaagcatgaatcct
agcatcaagagtgaatccaaccattttattgcacctgcacaatccggaaagaaggaggta
acttggagaaatacggagatgggtgcaaaaggcaagccctggaacttctactctgtaggg
gatatgtttacaaatggagcttcttttgtccaaaccggccgcagaggtacggcaaagcct
aactacaataaggagcaaaagttcaaagttggaagtgcaaactctgttcagtcaatgact
agctcagcaggtgctttaacatgtacaagaacattgacatgctga
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