Populus alba (white poplar): 118033354
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Entry
118033354 CDS
T07314
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118033354
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118033354
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Gene cluster
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
DUF7639
Motif
Other DBs
NCBI-GeneID:
118033354
NCBI-ProteinID:
XP_034894193
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Position
15:complement(12882710..12884832)
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AA seq
435 aa
AA seq
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MGAVKNYMLLVFFALAMQTSTPKAGIANFDEYWKKRAEEAKEASREAYEPNPEKVAEHFN
YEVHKSLEGGNSTRRNLGKYKGPCLATNPIDQCWRCDKNWAKNRKKLGGCALGFGRKTIG
GMHGKYYRVTDPSDNDMVNPKPGTLRYGVIQDEPLWIIFAHDMAISLSEELMVASNKTID
GRGANVHIYNGAQITLQFVRNVIIHGIHIHGAKAGNGGMIRDSVDHYGFRSRSDGDGISI
FGSTDIWIDRISMSNCEDGLIDAVMGSNAITISNCHFTKHNDVMLLGASDSYSGDSVMQI
TVAFNHFGRGLVQRMPRVRWGFVHVVNNDYTHWEMYAIGGSQHPTIISQGNRFIAPSDPA
CKEVTKRDYAVESVWKSWNWRSEGDLMLNGAFFVQSGNAIKTMNKPGVINAKPGGHVSML
TRFSGALDCVSGRPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgttaaaaattacatgttgttagttttctttgcattagccatgcaaacttca
actccaaaggccggcatcgcgaatttcgacgagtactggaaaaagcgagctgaagaggcc
aaggaggcttcccgcgaggcctacgaaccaaatccagagaaagtcgctgaacatttcaac
tatgaagtgcacaagtcattggaaggtggcaatagcacaagaaggaatctaggaaaatac
aaagggccatgcctagcaacaaatcctatcgaccaatgctggagatgtgataaaaactgg
gctaagaaccgcaagaagctgggaggttgtgctctagggtttggacgcaaaaccatagga
ggcatgcatggaaaatactaccgggtaacagacccgtcagacaacgacatggtgaatcct
aaaccaggaacattgcgctatggagtgattcaggacgaaccgctttggattatatttgct
catgatatggctattagtctaagtgaagaactaatggtggcatcaaataagactattgat
gggcgcggtgctaatgtgcacatttacaatggtgctcaaattactctacagtttgtgaga
aatgtgatcatccatgggatccacattcatggtgctaaagctggaaatggtgggatgatt
agagactcggtagatcattatggctttcgttctcggagcgatggagatgggatttcaata
tttgggtcaactgatatttggattgatcgtatctccatgtctaattgcgaagatggcctc
attgatgccgtaatgggatccaatgccatcaccatatctaattgccacttcaccaaacat
aatgatgtaatgttgttgggggcaagcgatagttattctggcgattcagtgatgcaaata
actgttgctttcaaccactttggtcgtggattagtgcaaagaatgccgagggtccgatgg
gggtttgtgcatgttgtaaacaatgactatactcactgggaaatgtatgctattggtggc
agccaacatcctactatcattagccagggtaaccggtttattgctccttctgatccagca
tgcaaagaggtgaccaagagggactatgcagttgaaagtgtgtggaagtcctggaattgg
agatcagagggggatttgatgctcaacggagccttctttgttcaatctggtaatgcaatc
aagacaatgaataaaccgggtgtgattaatgcaaagcctggtggacatgtgagcatgctc
acacgcttttcgggtgctctcgattgcgttagcggtagaccttgttaa
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