KEGG   Populus alba (white poplar): 118033563
Entry
118033563         CDS       T07314                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118033563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:palz03041]
    118033563
Spliceosome [BR:palz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118033563
 Complex B
    118033563
 Complex C
   U2 SnRNP specific factors
    118033563
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N
Other DBs
NCBI-GeneID: 118033563
NCBI-ProteinID: XP_034894468
LinkDB
Position
12:complement(2545777..2551584)
AA seq 509 aa
MSSTLLEVTRASHEEVERLERLIVKDLQNEPANNKDRLFQSHRVRNMIENIITTTEKLVE
IYEDKDNARRDEIAALGGQTAMGTNVFSAFYDRLKEIREYHRRHPAARVVDANEDYEAML
KEEPVIEFTGEEAFGKYLDMHELYNQYNNLKFEKPIEYSTYLDIFSQPNIVPRKLKFSRQ
YREYMENLLEYLVYFFQRTEPLQDLDRIFSKVTTEFEEQWENDAVQGWEKTSQENGHLSA
DHTVIDLDFYSTVEELKEVGPEKLKEALAALGLKSGGTVQQRAERLFLTKDTPLEKLDKK
HFVKGSHGSEPNGGAATSKEVDNSKEIALMEAKINKLCDLLDETIVRTKENVVKKQALTY
DEMEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAQELWKGIQERQGVNKWR
PDLEEEYEDKEGNIYNRKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctattagaggtgactcgcgcctctcacgaggaagtagagagactcgaa
cgactcatcgttaaggatctccaaaacgaaccagcaaataacaaggaccgtctttttcaa
agccaccgtgtccgtaacatgattgaaaatatcattaccactactgagaaactcgttgag
atatacgaagataaagataatgctaggagagatgagattgctgcgcttggaggacaaacc
gcgatggggactaatgtgtttagtgctttctatgatagattaaaagagattcgagagtat
catagaaggcatccagcagctcgggttgttgatgccaatgaggattatgaggcaatgctt
aaagaagagccagtaattgagtttacaggcgaggaagcatttgggaaatacctagacatg
catgaattgtataaccagtacaataatttaaaattcgagaagcctattgaatactctact
tatcttgacattttctcccaaccaaatattgtaccccgcaaattgaagttttcaaggcag
tacagggaatacatggagaatctacttgaatatttagtttattttttccagcggacagag
cccttgcaagatcttgataggattttttcaaaggttactactgaatttgaagagcaatgg
gaaaatgatgcagttcaaggatgggaaaagaccagtcaagaaaatgggcatttgtcagct
gatcatactgttattgatcttgatttttacagcaccgttgaggagctgaaagaagtgggc
ccggaaaaattaaaggaggcattggctgcattggggctaaagagtggtggtactgtacag
cagcgtgcagaaaggcttttcctcacaaaggacacacctcttgaaaagttggacaagaaa
cattttgtgaaaggatcacatggatcagaaccgaatgggggtgctgcaacctcaaaagaa
gtagacaattcaaaagaaattgccctgatggaggccaaaattaataaattgtgcgactta
ctagatgagacaattgtacgaacaaaagaaaatgttgtgaagaagcaggctttgacatat
gatgaaatggaagcagaacgtgaggaggaagagacacaggctgacactgaaagtgatgat
gatgaacaacagatttacaatcctctcaagttgccaatgggttgggatgggaagcctata
ccttactggctgtataaacttcatggtcttggtcaggaatttaagtgcgagatatgtggg
aactatagttactggggtcgaagagcctttgagcggcatttcaaggaatggcgtcatcag
catgggatgcgttgccttggcattccaaacaccaagaacttcaacgagatcacgtcgatt
aaggaagcacaagaattatggaaggggatacaagagcggcaaggagtgaacaagtggcgc
ccagatctcgaggaagaatacgaagataaagagggtaacatttacaatagaaagacatac
actgatctccagcgccagggactgatttga

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