KEGG   Populus alba (white poplar): 118042903
Entry
118042903         CDS       T07314                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
palz  Populus alba (white poplar)
Pathway
palz03020  RNA polymerase
palz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118042903
  09124 Replication and repair
   03420 Nucleotide excision repair
    118042903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:palz03021]
    118042903
   03400 DNA repair and recombination proteins [BR:palz03400]
    118042903
Transcription machinery [BR:palz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     118042903
  RNA polymerase III system
   RNA polymerase III
     118042903
  RNA polymerase I system
   RNA polymerase I
     118042903
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      118042903
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG DTP-pb9_B-dom Cellulase
Other DBs
NCBI-GeneID: 118042903
NCBI-ProteinID: XP_034906538
LinkDB
Position
13:6568498..6571099
AA seq 143 aa
MEDLLDFFAIEKLNPDGKKYDKVSRIVARSEKGDLYMVLDVHTEIYPIEEKSRYLVLLTE
TLNTDGTPVDPRNAQGKQPSKEDKFEYVTHGKLYKIDKEGSGADFKLEIYISFGGLQLLL
RGSPSSLARFQLDKNYFMLMRKM
NT seq 432 nt   +upstreamnt  +downstreamnt
atggaagatttgcttgacttctttgccatcgagaagctcaaccctgatggcaagaaatat
gacaaagtttctcgcattgtcgctcgcagtgagaagggggatttatacatggtgcttgat
gtacacacggagatttatcctattgaagaaaaatcaaggtatttagtcctattaactgaa
actttgaacaccgatggcactccggttgaccctcgtaatgcacagggcaagcaaccatcc
aaagaagacaagtttgagtatgtgacacacgggaaactttacaaaattgacaaggaaggt
tcaggagctgatttcaagttggagatctacatttcatttggtggacttcaactgttgctg
agggggagtcctagctcgcttgccaggtttcagcttgataaaaattattttatgttgatg
aggaagatgtag

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