Populus alba (white poplar): 118044799
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Entry
118044799 CDS
T07314
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118044799
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
118044799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
nSTAND3
AAA_14
NPHP3_N
Viral_helicase1
Cytidylate_kin
AAA_28
TIP49
AAA_2
NACHT
AAA_30
RNA_helicase
ABC_tran
ATPase_2
DUF815
AAA_5
TsaE
AAA_33
AAA_24
RuvB_N
AAA_11
KAP_NTPase
AAA_17
AAA_25
AAA_7
bpMoxR
nSTAND1
Rad17
SLFN-g3_helicase
IstB_IS21
PduV-EutP
AAA_3
AAA_19
DnaB_C
KTI12
Mg_chelatase
NB-ARC
NTPase_1
ResIII
SRPRB
Cytidylate_kin2
nSTAND6
Motif
Other DBs
NCBI-GeneID:
118044799
NCBI-ProteinID:
XP_034909173
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All DBs
Position
12:10853389..10857444
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AA seq
465 aa
AA seq
DB search
MTTSPSPMDITIQNPIETTAISHDLSDGNGVALPSSSPSPILTHRKFLVSVEVCLKPSST
ARVEDVRLAVERMLEKRSLSYVDGPIPVPIDDQFLFENVQRICVCDTDEWVTNHDILLFW
QVKPVVHVFQLSEEGPCEELGGDGQLSSFNDWILPAKEFDGMWESLIYEFGLKQRLLRYA
ASALFFTEKGVDPFLVSWNRLILLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVN
AHSLFSKWFSESGKLVAKLFQKIQEMIEEENNLVFVLIDEVESLAAARKAALSGSEPSDS
IRVVNALLTQMDKLKTSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRS
CLQELLRTGIILNFQDSDYLMLPNYSTLREKLNAPDIQEAQPVLPFWKQLLEAAEACEGM
SGRTLRKLPFLAHAALSNPNSCDASEFLCAMIDTARREHSELPES
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaagtcccagtcccatggacataacgatccaaaaccccattgaaaccacagcc
ataagccatgatttatccgatggtaatggcgtggctttgccctcctcttccccttccccc
attcttacccatcgcaaattcctcgtttctgttgaagtttgcttaaaaccctcaagcaca
gctcgcgttgaagatgtgcggttagccgttgaaagaatgcttgaaaagaggagtttaagc
tatgttgatggaccaattcccgtgccaattgatgaccaatttctctttgaaaatgtacaa
agaatctgcgtttgtgatacggatgaatgggtgaccaaccatgatattctcctgttctgg
caagtcaaacctgttgtacatgtctttcagctcagtgaggaaggtccgtgtgaggagcta
ggtggggatggccaactttctagctttaatgattggattcttccagctaaggaatttgat
ggcatgtgggaaagcttaatttatgaatttggtctcaagcaaaggttattgcggtatgca
gccagtgcattgttctttactgaaaagggtgttgatccttttcttgtttcatggaatcgc
cttattcttttacatggacctccagggactgggaagacttctttatgtaaagcattggct
cagaagctatcaatacgatttaactccagatacccccaatgccaattgattgaagttaat
gctcattctttgtttagcaaatggttctctgaaagtggcaagctggttgcaaaacttttc
cagaaaatacaggaaatgatagaggaagaaaacaatctggtatttgttttgattgatgaa
gttgaaagcctcgctgctgctagaaaagctgctttatctggttctgaaccttcagattct
attcgagttgtgaatgctctcctaacacagatggacaaattgaaaacatcaccaaatgtg
atcatcctgactacatcaaatataactgctgctattgatattgcatttgttgatcgagct
gacatcaaagcatatgttggtcccccaactcttcaagctcgttatgaaattctaagatcc
tgtttgcaagaactcctgcgaacaggaataatattaaatttccaggactctgactatctc
atgcttccaaattattcaaccttgagagagaaattaaatgcaccagatattcaggaagct
cagcctgtgctgcccttttggaagcaattgcttgaagctgcggaagcatgtgagggaatg
agtggaagaacattgagaaaacttccatttttggcacacgcagctctttcaaatccaaac
agttgtgatgctagtgaattcttgtgcgcaatgatagatacagcaaggagggagcattct
gagctacctgaatcctga
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