Populus alba (white poplar): 118049757
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Entry
118049757 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118049757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118049757
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118049757
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118049757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
YpzI
Motif
Other DBs
NCBI-GeneID:
118049757
NCBI-ProteinID:
XP_034915733
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All DBs
Position
1:complement(1049416..1052549)
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AA seq
286 aa
AA seq
DB search
MATSAAELRGSHFRKAATPNSGNLGKQSTGNMQDLLDCPVCFTMMYPPIFQCPNGHTLCS
QCRARVKNSCPICRGELGNIRCLALEKIAESIELPCTYQSAGCCDIFPYYSKPKHEENCK
YRPYNCPYAGAECSVTGDISILIKHLKNDHKVDMHDGCTFNHRYVKSDAGEIDNATWMLT
VFNCFGRQFCLHFETFFIGMSPVYMAFLRFMGTEDEAREFSYSIEVGGNGRKLTWQGVPR
SIRDSHQKVRDSQDGLIIQRNLALFFSGGDRQELKLKVSGRIWKEQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctgctgctgagttaagaggctcccatttcagaaaagctgcaacccctaac
agtggaaatctgggaaaacaatcaactggtaacatgcaagaccttcttgactgtcctgtt
tgcttcactatgatgtaccctccaattttccagtgtccaaatggccacactctatgctca
caatgcagggccagagtaaagaactcttgcccaatttgccgaggagagctaggaaatata
aggtgcttggctctggaaaaaattgctgagtcaatagaacttccttgcacgtaccaaagt
gcgggatgttgtgacatatttccctactacagcaagccaaaacatgaagagaactgcaaa
tatcgtccatacaactgcccttatgctggagctgaatgttctgtcactggtgacatttca
attctcatcaagcatcttaagaatgatcataaggttgatatgcatgatggatgcaccttc
aatcacagatatgtcaagtctgatgccggagaaatcgacaatgccacatggatgttaact
gtttttaattgttttggccgacagttttgcttgcactttgagactttttttataggaatg
tcacctgtttacatggccttcctaagattcatgggcaccgaagacgaggcaagggagttc
agttatagcattgaagttggtggtaatggaagaaagcttacatggcaaggagttcccaga
agtataagggatagccatcagaaagttagagacagccaagatggactgatcattcagaga
aacttggcacttttcttctccggaggggatcggcaggagttaaaactgaaagtttcagga
cggatttggaaagaacagtga
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