Populus alba (white poplar): 118050224
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Entry
118050224 CDS
T07314
Name
(RefSeq) chaperone protein ClpB3, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
palz03110
]
118050224
Chaperones and folding catalysts [BR:
palz03110
]
Heat shock proteins
HSP100
118050224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
AAA_7
AAA_28
TniB
Zeta_toxin
Mg_chelatase
AAA_18
AAA_24
ABC_tran
NBD_SMAX1
NACHT
AAA_25
Torsin
T2SSE
DUF1192
Motif
Other DBs
NCBI-GeneID:
118050224
NCBI-ProteinID:
XP_034916380
LinkDB
All DBs
Position
6:23414026..23421169
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AA seq
977 aa
AA seq
DB search
MASKRLTKSALTTIKSTSKLSRLSHSPHSSLSRIRAISSSSSSSSLLGSAFSRPLNDNKN
VVFANFSTITSTRFFHSSSPRFSSATASSSQVDPSQFTEMAWEGVVGAVETAQANKQQVV
ETEHLMKSLLEQKDGLARRIFAKIGVDNSSALQITIDFISQQPKVTGGTSGPVMGSNLSS
LLDNARKNKRDMGDDFVSVEHIVLAFHLDKRFGQQFLRNLGVSEKDLRDAVTAVRGNQRV
TDQNPEGKYQALDKYGSDLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPG
VGKTAIAEGLAQRIVRGDVPEPLLNRKLISLDMGALVAGAKYRGEFEERLKAVLKEVTAS
NGQIILFIDEIHTVVGAGATSGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPAL
ARRFQQVFCDQPAVEDTISILRGLRERYELHHGVKISDSALVAAAVLADRYITERFLPDK
AIDLVDEAAAKLKMEITSKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEHDLE
ELKQKQKELNELWDREKDLMNRIRSLKEEIDRVNQEMEAAEREYDLNRAAELRYGTLMSL
QRQLEEADKNLSEFRKSGKSLLREEVTDFDIAEIVSKWTGIPVSNLQQSEKEKLVLLEEV
LHRRVVGQDIAVRSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALASFLFNT
ENALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHD
VFNILLQLLDDGRITDSQGRTVSFTNAVVIMTSNIGSHLILETLSNTHDTKEVVYDIMKK
QVVDLARQHFRPEFMNRIDEYIVFKPLDSKEINRIVEIQMNRLRERLKQKKIDLHYTKEA
TDLLGKLGFDPNFGARPVKRVIQQLVENEIAMGVLKGDFKEEDSIIVDADVASDLPPQNR
LHIRKIESSSLREAMVA
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaaaaggctaacgaaatcagctttaaccaccattaaatccacctcaaagcta
tcaagactgtctcactcgcctcactcttcactctctcgcattcgcgcaatctcctcctcc
tcctcctcctcttcactgctcggctcggccttttctcggcctctaaacgacaataaaaat
gtcgttttcgccaacttttcaacgatcacttccactcgcttctttcactcttcctctcct
cgtttctcctctgccacggccagctcctctcaggttgatccgtctcagttcactgagatg
gcgtgggagggggtagttggtgctgttgaaacagcacaagctaacaagcaacaagtagtg
gaaactgagcatttgatgaaatccctattggagcaaaaggatggattggcgagaagaatc
tttgcaaagattggagttgacaactcttcagctttgcaaatcacaatcgactttatatcg
caacaaccaaaggtgacaggtgggaccagtggccctgtaatgggttccaatctcagctcc
ttgttggacaatgcgcgaaagaataagagggatatgggagatgattttgtttctgtagag
catattgttttggcattccatttagacaagaggttcgggcagcagtttttgaggaacctt
ggggttagtgagaaggatttgagggatgctgttacagctgttcgtggaaatcagagagta
actgatcaaaatcctgaagggaaataccaggcactagataaatatgggagtgacttgact
gagcttgctaggcgtggaaaactcgatcctgtaataggtcgagatgatgaaattcggcgg
tgtatccagatattatcacgcagaacaaaaaataatcctgttattattggcgagcctggt
gtgggaaaaactgcaattgctgagggactagctcaaagaattgtgcgtggtgacgtgcca
gaacctctgttgaatcggaagttaatctccctggacatgggtgcattggttgctggtgcc
aagtatcgtggagaatttgaggagaggttaaaagctgtgctgaaggaagttactgcttca
aatgggcagatcatattattcattgacgagatccatactgttgttggtgcaggggctaca
tctggtgcaatggatgctgggaacttgttgaagccaatgcttgggcgaggtgagcttcgg
tgtataggggcaactacattgaatgagtataggaaatacattgagaaggatccagcactt
gcacgaaggtttcaacaagtgttctgtgatcaaccagctgttgaagatacaatatccatt
cttcgcgggctgcgtgagcgttatgagctacatcatggtgttaaaatatcagacagtgcc
cttgttgcagcagcagttcttgcagatagatacatcacagaacgttttttgcctgacaaa
gccattgaccttgttgatgaagcggctgcaaagctgaaaatggagatcacttctaaacct
acagagctggatgaaatcgatagagctgtgttgaagttggagatggagaagttgtctttg
aaaaatgacactgataaagcatcaaaagagaggttgagtaagcttgaacatgatttggaa
gaacttaagcaaaaacagaaagaactaaatgaactttgggatcgtgagaaggatctcatg
aatcgaatacgatccttaaaagaagagattgatagagtcaatcaagagatggaagctgct
gagcgtgagtatgacctgaaccgtgctgctgagctccgatatggaactctaatgtccctt
caacgccagttagaggaggctgacaaaaacctttctgaattccgaaagtctggaaagtct
ttgcttcgagaagaggtgactgattttgacattgctgaaattgtaagcaaatggactggt
atacctgtgtcaaaccttcagcaatcagagaaggagaagctagttttactggaagaggtg
ctacacaggagagtagttggtcaagatattgcagtgaggtcagtggctgatgccatccgg
cgttcaagggcaggactatctgatccaaatcgtccgatagctagctttatgttcatgggc
cccactggtgtgggcaaaactgagcttgcaaaggctttagccagtttcctctttaacact
gaaaatgctctagtaagaatagatatgagtgagtacatggaaaagcatgcggtttcacgc
ttggtgggggccccacctggttatgttggttatgaggaaggtgggcaactcactgaagtg
gttcgtagaaggccatattccgtagtactgtttgatgaaattgagaaagctcatcatgat
gtcttcaacattctgctacagttgttggatgatggaaggataactgactctcaaggaaga
actgttagttttactaatgctgttgtgattatgacttcaaacattggttcccatttgata
cttgaaactctcagtaatacacatgataccaaggaagttgtttatgatatcatgaaaaaa
caagttgtagatttggccagacaacatttccgtccggaattcatgaatcgtattgatgaa
tatattgttttcaagcctttggactccaaggaaatcaatagaattgttgagatacagatg
aatcgactgagagagaggctcaaacaaaagaaaatcgatctgcattacaccaaggaagcc
accgaccttttggggaaactgggctttgatccgaactttggagcgcggccagttaagcgt
gtgatacagcagttggttgagaatgaaattgcaatgggagtcttgaagggagatttcaag
gaagaagattcgattatagttgatgctgatgtagcttcagatcttcctccccagaacaga
ttgcacatcaggaaaatagagagcagttcattaagagaagccatggttgcctga
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