Populus alba (white poplar): 118050897
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Entry
118050897 CDS
T07314
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118050897
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118050897
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118050897
NCBI-ProteinID:
XP_034917255
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Position
4:643667..646007
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AA seq
391 aa
AA seq
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MASLAHVLLLSCLATFFASTLQDDSLNKPKSLSGYLPRNYKKVLNTIDSCWRTESDWATN
RRALADCAVGFGQAAIGGKYGKTYVVTTPDDDPINPKPGTLRYGAIRTEPLWIIFARDMV
VTLENELMINSYKTIDGRGANVEITGGPCLKIEYVSHVIIHGISIHDCKPGKKGLVRSSP
THVGERRGADGDAIAISASSNIWIDHCYLARCMDGLIDVIHATTAVTISNNYFTEHDKVM
LLGHNDKYTEDQVMKVTVVFNHFGPKLNQRMPRVRFGYAHVANNRYDKWQMYAIGGSAGS
TIFSEGNYFIAPDISYAKEVTKREVHGGWKNWKWRSSKDVFMNDAYFVQSGYGRCAPRYS
KAQSFTVSPGAMAPALTSDAGPLSCVVGEAC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctagctcacgtcttgttgctttcatgtcttgctacattctttgcttcaacc
ttgcaggatgattcacttaacaagcctaaatccttatcaggctatcttccaagaaattat
aagaaagtcctgaataccatcgactcatgttggcggacggagtccgattgggctaccaat
cgtcgtgctttggccgattgtgctgtgggatttggccaggctgcaatcggagggaaatat
gggaaaacatacgtcgtcactactccggatgatgatccgataaatccgaaaccaggcacg
cttcggtatggtgctatccggactgagcctctttggatcatttttgccagagacatggtt
gttacactcgaaaatgagcttatgataaatagttacaagactatagatgggagaggtgct
aatgtcgagattacaggcgggccgtgcctaaaaattgaatatgttagccatgttatcata
catgggattagcattcatgactgcaagccaggtaaaaaggggcttgttaggagtagtccg
acgcacgttggagaacgccgaggtgctgacggagatgccattgccatctctgcatcgtct
aatatttggattgaccattgctatcttgctcgctgcatggatggcctaattgatgtgatt
catgctaccactgctgtcactatctctaacaactatttcaccgagcatgataaggtgatg
ctgctaggacacaacgataaatacactgaggatcaagttatgaaagtaacagttgtcttc
aatcattttggccctaaactcaatcaaagaatgccaagagtaaggtttggttatgcccac
gttgccaacaacagatatgataaatggcaaatgtatgccattggcggcagtgctggttca
accatattcagtgaagggaactacttcattgctcctgacatttcctatgccaaagaggtt
accaagagagaggttcatggtggttggaagaattggaagtggaggtcatccaaggatgta
tttatgaacgatgcttattttgtccaatctggttatggaaggtgtgcaccacgttattcc
aaagcccagtcctttacagtttctccaggagctatggctcctgctttgacttctgatgca
ggccctttaagctgtgttgttggtgaagcatgttga
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