KEGG   Populus alba (white poplar): 118051002
Entry
118051002         CDS       T07314                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 21-like
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118051002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:palz03041]
    118051002
Enzymes [BR:palz01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     118051002
Spliceosome [BR:palz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    118051002
 Complex C
   U5 SnRNP specific factors
    118051002
SSDB
Motif
Pfam: DEAD Helicase_C ResIII DUF2608
Other DBs
NCBI-GeneID: 118051002
NCBI-ProteinID: XP_034917391
LinkDB
Position
Unknown
AA seq 712 aa
MKRSFDDIGVSKTQSKPVFLTKAQREQLALQRRQEEIEQQKKRQQLLLSQTRPSNSESDK
PLSNSDRRDQRDRDREREMERDRDRDRDRERERERERERERERERSSRRNREREREEEAK
AREQARLDKLAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN
ILYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKDFRDELRKKEGVEKNPEEAAAQKLK
EEAADRYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWAESKLT
SELLKAVERVGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTCAFVLPMLTYISRLPPM
SEDNEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE
VVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENE
DEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMTKES
EKSSRLHRLLDELGDKTAIVFVNTKKNADMVAKNLDKHGYRVTTLHGGKSQEQREISLEG
FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT
LGDTDVFYDLKQMLTQSNSSVPPELARHEASKFKPGTIPDRPPRRNDTVFAH
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgaaacgctcattcgacgacattggcgtctccaaaacccaaagcaaacctgtcttcttg
accaaagctcaacgcgaacaattagcccttcaacgccgccaagaagaaatcgaacagcaa
aagaaacgccaacaactcctcctctcccaaacccgcccttccaactcggagtccgacaaa
cccctatccaattctgaccgccgtgaccagcgtgacagagaccgagagcgcgagatggag
agagatagagatagagatagagatagggaaagggaaagggaaagggaacgggaacgggaa
cgagaacgcgaacgctcctcgcggcgcaacagagaacgcgaacgtgaagaggaagcaaag
gcgcgtgagcaagccagactggataaattagcggagagagagcgagagaaggagctggat
gcgattaaagagcaatatctagggtcgaaaaagcctaagaagagagtaataaaacctagt
gagaagtttcgcttctcttttgattgggaaaacacggaagacacgtctagagacatgaat
attttgtatcaaaaccctcatgaggcacaacttttgttcggtcgagggtttagggctgga
atggacaggagagagcagaaaaaacttgctgcaaagaatgagaaagattttagagacgag
cttcgaaagaaagaaggtgtagagaagaatccagaagaggcggctgcccaaaaattgaag
gaagaagctgctgataggtatgatacttttgatatgcgtgttgataggcattggtccgag
aagaagcttgaagaaatgactgagagagattggagaatatttagggaagattttaatatt
tcttataagggttccaagattccgcggcccatgaggagttgggcagagagtaagttgact
agcgagttgttgaaggcagtggagagggtagggtataagaagccgtctcctattcaaatg
gcagcgattccactgggattgcaacaacgggatgttatcgggattgctgagactggttca
ggtaagacttgtgcttttgttttgcctatgttgacttatatttctaggttgcctccaatg
agtgaggataatgaggccgaagggccttatgcagttgttatggcacctactcgtgagttg
gcgcaacaaattgaggatgaaactgtcaagtttgcacattatttgggtattaaagttgtt
tctattgtcggtgggcagtctattgaagagcaagggtttaggattaggcaaggttgtgag
gtggttattgctactccaggtcgtttgcttgattgtttggagaggcgttatgctgtgttg
aatcagtgtaattatgttgtgcttgatgaggctgataggatgattgatatgggttttgaa
ccccaggttatgggagtgttggatgcaatgccatcgagcaatttgaagccagaaaatgaa
gatgaagagcttgatgagaagaagatttatcgcaccacttatatgtttagtgctaccatg
ccacctgcagtggagcggcttgcgaggaagtacttgagaaaccctgttgtggtcactatt
ggcactgctgggaaggccactgacttgatatctcaacatgtgataatgacgaaggaatcg
gagaagtccagcaggttgcatagattgcttgatgaacttggagataagactgcaattgtt
tttgttaacactaaaaagaatgcagatatggtggccaagaatttggacaagcatggctat
cgtgtgacaactttgcatggtgggaagtcccaggagcaaagggaaattagccttgaaggt
tttaggaccaaaagatacaatgttcttgtggcaacagatgttgcaggtcgtggtattgat
atacctgatgtggcccatgtcattaattatgatatgcctggaaatattgaaatgtatact
caccgaattggacgaacaggccgtgctggaaagacaggtgtggctacaacattcttaact
cttggggacacagatgttttttatgatctcaagcaaatgcttacccagagtaacagttct
gtgcctcctgagttggctaggcacgaggcttcaaaattcaagccaggaacaattcctgat
agacctcctagacgaaatgacactgtttttgctcactga

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