Populus alba (white poplar): 118052226
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Entry
118052226 CDS
T07314
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118052226
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118052226
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118052226
NCBI-ProteinID:
XP_034919009
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All DBs
Position
8:2919841..2921623
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AA seq
327 aa
AA seq
DB search
MATLPYADVDSSLRAMAGRAEGFGRFSVGGLHGPLYSVTTLADDGPGSLREGCRRQEPLW
IVFEVSGTINLVSQLSVSSYKTIDGRGQRIKIAGKGLRLKECEHIIVCNLEFEGGTGHDI
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADASHVG
DRCIRVTIHHCFFNGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVEAQIYSQCNIYEA
GQKKKTFEFYTEKAADRQGASSGLIRSEGDALLNGAQSCLLQGVGEHCVFHPGEYYPTWT
LESPLDSLKDVLQICTGWQSIPRPAGM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctgccttacgctgacgtggattccagcttgagagccatggccggtcgagca
gaagggtttggccggttctccgtcggtggcctccacggtcctctctactctgtcaccacc
ttggctgatgatgggccaggatcactacgtgagggttgcaggagacaagaaccattgtgg
attgttttcgaggtttctggtacaattaatcttgtgtcacaattaagcgtgtcatcttat
aaaacaatagatggcagaggtcaaagaattaagattgccggaaaaggattaagattgaaa
gaatgcgaacacataattgtctgtaaccttgaatttgaaggtggtacaggacatgatatt
gatggcatccaaataaagcctaattctagacatatttggattgatagatgtagtcttcgt
gattatgatgatggtcttattgatattaccagacaaagcactgatatcactgtttctagg
tgttattttgcacaacatgacaagacaatgctgattggagcagatgcatctcatgttggt
gatagatgcataagagtgacaattcatcattgtttttttaatggaacaaggcaaagacat
ccgcgtcttagattcgggaaagttcatttgtacaacaattatacaaggaattggggaatt
tatgctgtttgtgcaagtgtagaagcccagatatattctcaatgcaatatatatgaagca
ggacagaagaaaaagacttttgaattttacacagaaaaggcagcagacagacaaggggct
agttctggtttaataagatctgaaggagatgcattgctgaatggagctcaatcatgctta
ttacaaggtgttggagaacactgtgtgttccatccaggtgaatattatccaacttggacc
ctggagtcccccttggattctctgaaagatgtcctccaaatctgcactggttggcaatct
attcctcgaccagcagggatgtag
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