KEGG   Populus alba (white poplar): 118057211
Entry
118057211         CDS       T07314                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118057211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:palz03041]
    118057211
Spliceosome [BR:palz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118057211
 Complex B
    118057211
 Complex C
   U2 SnRNP specific factors
    118057211
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 118057211
NCBI-ProteinID: XP_034925605
LinkDB
Position
15:complement(6324867..6330731)
AA seq 509 aa
MSSTLLEVTRASHEEVERLERLIVKDLQNEPANNKDRLFQSHRVRNMIENIISTTEKLVE
IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDANEDYEAML
KEEPVIEFTGEEAFGKYLDMHELYNQFNNLKFEKPIEYSTYLDIFSQPHNLPRKVKFTRQ
YREYMENLLEYLFYFFQRTEPLQDLDRILSKVTTEFEEQWENGMVQGWEKNVQENGHVPA
DHTVIDLDFYSTVEELKEVGPEKLKEALAALGLKSGGTIQQRAERLFLTKHTPLEKLDKK
HFVKGSCASESNGGAVNSKEVVNSKEIALMETKMNKLCDLLDETIVRTKENVVKKQALTY
DEMEAEREEEETQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQELKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAQELWKRIQARQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctattagaggtgactcgagcctctcacgaggaagtagagagactcgaa
cgacttatcgttaaagatctccaaaatgaaccagcaaacaacaaggaccgtctttttcaa
agccaccgtgttcgtaacatgatcgaaaatatcatttccactactgagaaactcgttgag
atttatgaagataaagataatgcgaggaaagatgagattgcggcgcttggtggacaaacg
gcgactggaaccaatgtgttcagtgctttttatgatagattaaaagagatccgtgagtat
catagaaggcatccagcggcgcgtgtggttgatgctaatgaggattatgaggcaatgctt
aaagaggaaccagttattgagtttactggtgaggaagcatttgggaaatacttagacatg
catgaattgtataaccagttcaataatttaaaattcgagaagcctattgaatactctact
taccttgacattttctcccaaccacataatttaccccgtaaagtgaagtttacaaggcaa
tacagggaatacatggagaatctacttgaatatttattttattttttccagaggacagag
cccttgcaagatcttgataggattttgtcaaaggttaccactgaatttgaagagcaatgg
gaaaatggcatggtacaaggatgggaaaagaatgttcaagaaaatgggcatgtgccagct
gatcatactgttattgatcttgatttttacagcactgttgaggagcttaaagaagtgggc
cctgaaaaattgaaggaggcattggctgcattggggctcaagagtggcggtaccattcag
cagcgtgctgaaaggctttttctcacaaagcatacacctcttgaaaagttggacaagaaa
cattttgtgaaaggttcatgtgcatcagaatcgaatggaggtgctgtgaactcaaaggaa
gttgtcaattcaaaagaaattgccctgatggagaccaaaatgaataaattgtgtgattta
ctggatgagacaattgtacggacaaaagaaaatgttgtgaagaagcaggctttgacatat
gatgaaatggaagcagaacgtgaggaggaagagacacaggctgacactgaaagtgacgat
gaagaacaacagatttacaatcccctcaagttgccaatgggttgggatgggaagcctatt
ccttactggctgtataaacttcatggtcttggtcaggaacttaaatgcgagatatgtggg
aactatagttactggggtcgtagagcgtttgagcggcatttcaaggaatggcgtcatcag
catggaatgcgctgccttggcatcccaaacaccaagaacttcaatgagatcacatcgatc
gaggaagcacaggaattatggaagaggatacaagcgcggcaaggagtgaacaagtggcgc
ccagatcttgaggaagaatatgaagataaagagggcaacatttacaataaaaagacatat
actgatctgcagcgccagggactgatttga

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