Populus alba (white poplar): 118059347
Help
Entry
118059347 CDS
T07314
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118059347
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118059347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118059347
NCBI-ProteinID:
XP_034928089
LinkDB
All DBs
Position
14:218850..220319
Genome browser
AA seq
381 aa
AA seq
DB search
MVVLRHLVVVVVSIAILSFIPSACIAANKMNAIDQCWKRSPNWRRSRQQLASCSVGFAGT
MTGNVGRDVVMYKVTDPSDDPVNPKQGTLRHGATMITGKVWITFERNMDIKLEKPLLISS
YTAIDGRGVDVGIEGFGCFLVYKATDVIIHGLRIHHCNAQGPSTVMGPDGKQMQLGQMDG
DAIRLVSASKVWIDHNTLYSCQDGLLDVTRGSTFVTVSNNLFRDQDKVMLLGHDDGFLRD
KNMKVTVAFNRFGPKCNQRMPRIRHGYAHVANNLYRGWEQYAIGGSMSPSIKSESNYFIA
PTSGKKEVTWRNGISGKSKPWNFYSIGDLFTNGASFFQTGRRGMAKPNYNKEQSFKVGDA
KYVKALTSSAGALKCSRTSRC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcttaaggcaccttgtggtagtggtcgtttctattgccatcctttccttcatc
cccagtgcttgtattgctgccaacaaaatgaatgccatagatcaatgttggaaacggagt
ccgaattggcgaagaagccggcaacaactggcatcttgttctgtagggtttgcagggaca
atgactggcaatgttggaagagatgttgtaatgtataaagtcaccgatcctagtgatgac
cctgtgaaccccaaacaagggacgttaagacatggagccaccatgatcacaggcaaagtc
tggatcactttcgaaaggaacatggatatcaaacttgagaaacctcttcttattagcagc
tatactgccattgacggtcgcggtgttgatgttggaattgaaggcttcggatgcttcttg
gtgtacaaggcaacggacgtgatcatccatggcctgaggattcaccattgcaatgcacaa
gggcctagcacagtcatgggaccagatgggaaacaaatgcaattaggtcagatggatggg
gatgcaataaggctggtcagtgcatctaaggtttggatagatcacaacacactgtattca
tgccaggatggtcttcttgatgtcactcgaggatctacatttgttactgtctctaacaat
ttgtttagagaccaagacaaggtcatgctacttggccatgatgatgggttcttgagggac
aagaacatgaaggtcactgttgccttcaatcgtttcggacctaaatgtaaccagagaatg
ccaaggattcgccatggatatgcacatgtagccaacaatctgtaccgaggatgggaacag
tatgcaattgggggaagtatgagtcctagcatcaagagcgaatccaactattttattgca
ccaacatcaggaaagaaggaggtaacatggagaaatgggatcagtgggaaaagcaagccc
tggaacttctactccataggggatctgtttacaaatggagcttcatttttccaaacaggt
cgcagaggtatggcaaagcctaactacaacaaggagcaaagcttcaaggttggagatgcc
aagtatgtgaaggcattgacaagctctgcaggtgctttgaagtgctcaaggacatctaga
tgctga
DBGET
integrated database retrieval system
