Populus alba (white poplar): 118059828
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Entry
118059828 CDS
T07314
Name
(RefSeq) probable pectate lyase 18 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118059828
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118059828
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118059828
NCBI-ProteinID:
XP_034928685
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Position
10:complement(20543557..20548756)
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AA seq
567 aa
AA seq
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MPCHIIIILFHYISYCKHITFSQNLQQLPKVFWLFFKKHTSTPSLKNLLLQRSTRLNNEY
LKAQAILIATSMKLPNIYILLICLFTSFSRFIIETTAFNLTLPHQHPDPEAVAEDVKRRV
NASLSRRHLLSIQEKGQCQTGNPIDDCWRCDSNWANNRQRLADCAIGFGQGSLGGRGGQI
YVVTDSSDQDPANPKPGTLRYGVIQDQPLWIIFSSNMVIKLKHELIFNSYKTIDGRGANV
HITGNGCITLQYISHIIIHNIHVHHCKPSGNTNIAASPTHVGWRGRSDGDGISIFGAQKI
WIDHCSLSYCTDGLIDAIMGSTGITISNNHFTHHDEVMLLGHDDKYALDTGMQVTIAFNH
FGQGLVQRMPRCRRGYIHVVNNDFTAWEMYAIGGSANPTINSQGNRYTAPTDDNAKEVTK
RVDTNEGDWAGWNWRTDGDIMVNGAFFVPSGAGLSAQYSKASSVEPKSAGLIQQLTLNAG
VFGDPRDDSGSISTPGFSGGGTSSTTNTGVQGSGSSGGDGDYFGMIFGSGAPPPTSTSFI
FLSLLIILILCTITNHVALESFPLLSL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgccatgtcatattattataatcttgtttcattatataagctactgcaaacacatcaca
ttttcccaaaatttgcagcagcttcctaaggttttttggttgttcttcaagaaacacaca
tccaccccttccttgaagaatcttcttctacagagaagcacaaggttaaacaacgaatac
ctaaaagcccaagccattttaattgctacttcgatgaagcttcccaacatctacattctc
ttaatttgcctgtttacttctttctctcgattcattattgaaactactgccttcaatctc
acccttccacaccagcatccagaccctgaggctgttgctgaagatgtaaaacggagagtc
aatgcatctctatcaagaaggcaccttttgtccattcaagagaagggccaatgccaaact
ggaaaccccatcgacgattgctggagatgcgactctaattgggctaacaaccgccaacgt
ttagctgactgcgccattggatttggtcaaggctcgttaggtggaagaggtggtcagatc
tatgtggtcactgactcctctgaccaggatccagccaacccaaaaccaggcacattacgt
tacggtgtcatccaagaccaacctctgtggatcatcttctcttcaaatatggtcattaag
ctcaaacatgagcttattttcaatagttacaaaactattgatggccgtggcgcaaatgtt
cacattacaggaaatgggtgcataacacttcaatacatatcacacattattatccacaac
atccacgttcaccactgcaagccttctggtaatactaacatagcagcatcaccaactcat
gttggatggagagggagatcagacggtgatggcatttccatttttggggcccagaagatt
tggatcgatcactgttctttatcttattgcactgatggtttgattgatgctataatgggg
tccactgggattaccatatcaaacaaccattttacccaccatgatgaagtgatgctattg
gggcatgatgacaagtatgcattggacacagggatgcaagttaccatagcctttaatcac
tttggccaagggctggtgcaacggatgccaaggtgtagaagagggtatatacatgtggtg
aacaatgattttacagcctgggagatgtatgctattggtggtagtgcgaatccaaccata
aatagtcaagggaatcgatataccgcaccaactgatgataatgccaaagaggtaacaaag
agggtggacacaaacgagggagactgggcaggttggaattggagaacagatggggacata
atggtaaacggagcgttctttgtgccctcaggagccggtctgagtgcacagtatagtaaa
gcctccagtgtggaacccaagtctgctggtttaattcaacaactcaccttgaatgctggt
gtcttcggtgaccctagagatgacagtgggagcatttctactccgggattcagcggaggt
gggactagctccacaaccaacaccggcgtccaggggtccgggtccagcggtggtgatggc
gattacttcggaatgatattcgggagcggcgctccaccacccacatctacaagctttatc
tttttgtcccttctaattattttaattctgtgcaccatcaccaaccatgttgccttggaa
tctttcccattattatcattatag
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