Populus alba (white poplar): 118061378
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Entry
118061378 CDS
T07314
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118061378
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118061378
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118061378
NCBI-ProteinID:
XP_034930704
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Position
1:5101080..5106255
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AA seq
450 aa
AA seq
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MAVSRKWACVFSAVLLLLFVGVMPTTSGTNGGIAALTRSVETEKVQSSSNTTMAARSQEE
ADALNEKAVADNPEEVVSMVEMSIRNSTERRRLGYFSCGTGNPIDDCWRCDPNWQKNRKR
LADCGIGFGRNAIGGRDGRFYVVTDPSDNDPVNPRPGTLRHAVIQDAPLWIVFKRDMVIQ
LKQELIMNSFKTIDGRGVNVHIANGGCITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSH
YGWRTMADGDAVSIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLL
GHSDSYIRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTI
NSQGNRYNAPVNPFAKEVTKRVDTAAGYWKNWNWRSEGDLLLNGAYFTPSGAGASSSYAR
ASSLGAKSSSMVGAMTANAGALGCRGARQC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtctaggaaatgggcttgtgtgttttctgctgtgcttctgttgttgttcgtt
ggtgtaatgcctactacttcaggaaccaatggtgggatcgctgctcttaccaggagtgtg
gaaacagagaaggtacagagctcaagcaacacaactatggcggccaggtctcaagaagag
gcggatgcattaaatgagaaagcagttgctgataaccctgaagaggttgtttcaatggtt
gagatgagcatccgcaacagtactgaaaggaggagacttggttacttctcttgtggaaca
ggcaatcctattgatgattgctggcgttgtgaccccaactggcagaagaaccgcaagcgc
cttgctgactgtggcattggttttggaagaaatgctattggtggccgtgatggtcgcttc
tatgttgttactgatcctagtgataatgaccctgtgaacccaaggcctggtactttgcgc
catgctgtgatccaggatgctcctctatggattgtgttcaaaagagacatggtgattcaa
ttgaagcaggaacttatcatgaacagcttcaagacaattgatggccgcggggtcaatgtt
cacatcgctaatggagggtgcattactatccaatttgttaccaatgtgatcattcatggg
ttacacattcatgattgcaagcccactggcaatgctatggtgcggagctcgccttctcac
tacggatggaggacaatggcggatggtgatgccgtctctatttttggatcaagccacatt
tgggttgatcacaactcgctttctcattgcgctgatggtctggtcgatgctgtcatgggt
tctactgccattaccgtctccaacaaccacttcacccaccataatgaggtaatgctattg
ggccatagtgactcttacatcagagacaagcaaatgcaagtgaccattgcgtacaaccat
tttggagagggactgatccagagaatgccaaggtgtagacacgggtacttccatgtggtg
aacaatgattacactcactgggaaatgtatgccatcggtggcagtgcagaacccaccatc
aacagccagggcaacagatataatgctccagtcaacccttttgcaaaggaggtgacaaag
agggtagatacagccgcgggctattggaaaaactggaattggaggtcagagggagacctg
ctgctgaatggtgcttacttcactccatctggagctggagcttcgtctagctatgctcgc
gcttcaagtttgggtgccaagtcttcttccatggtcggggcaatgactgctaatgctggt
gctcttggctgccgcggggcccgccagtgctag
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