Populus alba (white poplar): 118063421
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Entry
118063421 CDS
T07314
Name
(RefSeq) probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118063421
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118063421
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118063421
NCBI-ProteinID:
XP_034933334
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Position
14:complement(17380263..17384935)
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AA seq
442 aa
AA seq
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MAVSLRCFCTWTLLVLVMFLSVNAAEEKDELKLRLKETQELLSSKNSSMAEWSDDAWNEH
TVEDSEEVAAMVDESIRNSTERRKLGFFSCVTGNPIDDCWRCDPHWQLHRKRLANCGIGF
GRNAVGGRDGKYYVVSNPGDDDPVNPRPGTLRHAVIQVQPLWIVFKRDMVITLKQELIMN
SFKTIDARGTNVHIANGACITIQFVSNVIIHGLHIHDCKSTGNAMVRSSPSHYGWRTMAD
GDGISIFGASHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYKR
DKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYL
APANAFAKEVTKRVDTETGVWRHWNWRSEGDLLLNGAFFIPSGAGAAASYARASSLGAKS
SSMIGVITSNAGALVCRRGRRC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcgctaagatgcttttgtacatggacattgctggttctagttatgtttctc
agtgtaaacgctgcggaagagaaagacgaactgaaattgaggttgaaggaaacgcaggag
ttgctaagctcaaagaactcgtcgatggcagagtggtctgatgatgcatggaacgagcac
actgtagaggattcagaggaggtggctgcaatggttgatgagagcatacgcaacagcact
gaaaggaggaaattgggatttttctcctgcgtaactggcaatcctattgatgattgttgg
cgatgtgatccccattggcaactccacagaaagcgccttgctaactgtggcattggtttt
ggacgcaatgctgtcggaggtcgcgatggaaaatactacgttgttagtaaccctggcgat
gatgaccctgttaacccaagaccagggactctacgacacgctgtcattcaagtccagcct
ttgtggattgtgttcaagagggacatggtgattaccctcaagcaagagcttatcatgaac
agcttcaagaccatagatgctcgtggaaccaatgtccacattgccaatggggcttgcatc
accatccagtttgtctcgaatgtcataattcacggtctccatatacatgattgtaagagc
acaggcaacgcgatggttcgtagctcgcctagccattatgggtggagaactatggctgac
ggagatggcatctccattttcggagcaagccacatctggattgatcacaattctctttca
aattgcgcagatggccttatcgatgctataatggggtccaccgccattaccatctcaaac
aactacttcactcaccataacgaggttatgctattaggccacagtgactcctataaaaga
gataagcagatgcaagtgaccattgcctataaccattttggtgaaggtcttatccagaga
atgcccaggtgcaggcatgggtatttccacgtggtgaacaatgactacacgcactgggaa
atgtatgccattggagggagtgctaatcccacgattaatagccagggcaacagatatctt
gcccctgccaacgcttttgccaaagaggtgacaaaaagggtagacacggaaactggagta
tggaggcattggaattggagatcagaaggcgacctcctgctaaacggagccttcttcatt
ccatcaggagctggagctgcagccagctatgccagggcctcaagcttaggggccaagtcc
tcatcgatgatcggggtcatcacttcaaatgctggagccctggtctgccgcaggggtcgc
cgatgttaa
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