Podospora anserina: PODANSg3020
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Entry
PODANSg3020 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pan
Podospora anserina
Pathway
pan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PODANSg3020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg3020
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PODANSg3020
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PODANSg3020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
6190515
NCBI-ProteinID:
XP_001905992
UniProt:
B2AR80
LinkDB
All DBs
Position
4
AA seq
2117 aa
AA seq
DB search
MASPQLIHEHGMDVYSRYFTRLVASNASQIFPGAGRPVANSNNNNMQLLVAEMELLARDF
SQARKIAESIETGTEDIFHNFDLSTFMEHFQLDALEKTLLALAFKLGSRADLKTKADAIL
STNYPTFVNILSRPTGEHMDMPAEFVAELLDRFIQLHPPNFNAAAKKELEYKVSMRYSQG
GDGKPPPSQVLAALDLIRLLADRPPNALALYIYRVGSAFTKDEETCVSYLQNRPSNIQLS
EEQVSAALLYTTISQTPPHKPSILVAALRRILPDSFQWQDVVSYFDHANARVTSAQFLRL
YNALLPIALEHLDRFNIQRLWGGEWENPETQLSFICAYASLTPEQLDATTIPGLKPTFTV
DEYVQSDRAIQEIAALAVRHPLVSEAALSAVFNVALHSMHASQSTEAKRLFQDVVVPNLH
VFVTSAFGVPKPWPTMAEETLASLFEGFLINKTPTSDFVMESLWRRDKVWVMQRLEEQHA
LKPIVLPTIFEFAVRHKWLQELVFLPTGFGLDLVAYAHAQGFLNLEQWASQNAERPGEMA
RAINQFLLIKTNLEQTYQRSGDNGQAHTPLQVKTVYMMLDILDRFNLKAPVVDLINVQRH
CITAYPRLINYGEGYDDIIDDNGRGGNMLAPAATTRMEEHYKKMYGDELQVRSVVEVLEH
YKHSRVPLEQDIFACMIHGLFDEYAHYVDYPLEALATTAVLFGGIISHKLISRLPLKIGL
GMILQAVKENRPEEPMYKFGLQALMQLFGRLREWPAFCKDLILIPGLQGTEAYRKAEEVV
REHDEELARTLRNGLPAIAGSDKQLTNGGLEDSLSSEQHPPPFLSINVGPPPAGISYEDP
TPDAQGKIQFALNNATDTTLQSIFKELQKMLDVKHQQWFASHLVEERAKMQPNYHHVYLE
LVKQFEDRLLWTEVLRETYVSVQRMLNSEQTQSNSTERTHLKNLGGWLGLLTLARDKPIK
HSNIAFRQLLIEALDTKRLIVVIPFVCKVLTQAANSNVFKPPNPWLMDIIHLLIELYHNA
ELKLNLKFEIEVLCKCLDLDHEAIEPSGEILNRPPLEDVGDLVGPDNLDSFESLSLNGMT
GVNSSLVSHPALAIPDLGPNLSVPSTEVVSAAKLHDIVRQALTRALQEIIQPVVDRSVTI
AAISTQQMIRKDFATEGDPDRVRMAAVNMVKSTAGSLALVTSKEPLRANFTNYLRQLASE
LPQGLPEGIIMLCVNSNMELASSIIEKSAEERGVPEIEDLLAEDLEARRHHRINRPNDPF
MDPRLNRWAWTIPAPFKLQPSLSGLNDEQMAIYDDFARQSRVTAAAAAAAAAAAAASVTP
SHVPSSSDARSIANEVLGDQYNSVSTIPTPAETPSLPHMGVQPQHYPPVHAGMVNGRQPG
ISPVDARNVAERVNSLLEKLATAVSNTAEEHFEDLPRTHEVINIHDAVVQLTIKTQQTSD
EFAVYVATQISGLLFRPQPEPTSLLLETLVHVLETLRKVAGPATSQQIRWLFYQQSGSTF
LNLPLISALLRTDLIDWHSIDAAMAKALNERSSGSIEFLESLMDLTLFSEAPVNLYTDFV
QSLEEAWAWITEEPEVPGGQRFKAKVLGPSPEIHPDRTPEAQFEQFDYIFEEWVQLCNND
CASEKAATKFVQQLNWRRHIVTKEDFFVFARQAIDKSVDRAEQSGHLGEGFSNESFQAVD
ALVKMILIFTQSHDAPGTSESSRVAFLDSVLALGVLVLNNHHVRRGDAFNPRVFFRFFSN
LFHQIMNLTERFSDSESEKIVLNFAARLWDLRPAVYPGFLFQWMGLLAHRAFLPAIMRMP
NQAGWEPFTKLLTHLFSYLGNMLKAFEVSLAAKDLYSGTVKLVAVLFHDFPEYLSANYVQ
LCQCLPSHATQLINMILSASTTPFDKVPDPFRPGLKIDRIPEMKDPVVSFYDCAGQLKEL
GLYDILEQSLQNGPSEDAIAQITHAMHHADTDLTTFGFVPVNVDRRVVDAVVSHIANAAS
QRAVNNSDAPVFVSGAPDVKTLHMLVTEVPAETRYYLLSSMVNELRFANASTNYFSHAIV
EIFGHDLDDPEETEIRQQIVRVLLERMVGYWPQPWGLVVTILELLKNEKFHFFELPFIKA
APEVAARFEAILRPVVA
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccccagcttatccatgagcacggcatggatgtctattcgagatacttcacg
cgcctggtggcctccaatgcctctcagatcttccccggcgcggggcggccagtagcgaat
tccaacaataacaacatgcaactcctcgttgccgaaatggagctgcttgccagagacttc
agccaagcgaggaagatcgccgagtcgatcgagaccggcaccgaagatatattccacaat
tttgacttgtcgacttttatggaacacttccaactcgatgccctcgaaaagacactgttg
gccctggccttcaaactaggtagcagggctgacctgaagaccaaagcggatgccattttg
tctaccaactacccaacctttgtgaatatcttgagtcgaccgactggggaacacatggac
atgcccgccgaattcgttgccgaactgctcgaccgattcatacaacttcacccgccaaac
ttcaatgctgccgccaagaaggagttggagtacaaggtgtcgatgcggtattcacaagga
ggagacggaaagccgcccccctctcaggttctggcggccctggacctgattcgcctcctc
gccgacaggccaccgaatgcactggccctctacatataccgtgtcgggtcagccttcacc
aaggacgaggagacatgcgtgagctacctccagaaccgaccttccaacatccaactgtcc
gaagagcaagtatctgccgcgcttctgtacaccaccatcagccagaccccgccacacaaa
ccctcgattctcgttgcggccctgaggcggatactgcccgacagcttccagtggcaggat
gtcgtttcgtatttcgaccatgcgaatgcacgcgtaacttcggcgcagtttctgcggtta
tacaatgcattattacccatcgcgctcgagcatctcgacaggttcaacattcaacggctg
tggggcggagaatgggagaatcccgaaacccagctgtccttcatttgcgcctatgcctca
ctcaccccggagcaactggatgccacaaccatcccaggcctcaagccgacgtttacggtg
gacgaatacgtacaatccgaccgggcaattcaggaaatagctgccctcgccgttagacac
ccactggtctccgaggctgctttgtctgctgtcttcaatgtggctctgcactcgatgcat
gcctcacagagcacagaggcgaagcgcctgtttcaagacgtcgttgtgcctaatctacat
gtctttgtcacctcagcctttggggttcctaagccgtggcccacaatggccgaagagacg
ctggcgtcgctattcgaggggtttctgatcaacaagacaccgacctccgactttgtgatg
gaaagcctctggagacgggacaaggtgtgggtcatgcagcggctggaagaacagcatgct
ctcaagcctattgtcttgccaaccatcttcgagtttgcggtgaggcacaagtggctccag
gagctggttttccttcccactggcttcgggcttgatctcgttgcctatgcgcatgcgcaa
ggttttctgaacttggagcagtgggcaagccagaacgctgagcgacccggcgagatggcc
agggccataaatcagtttctgttgataaaaacgaacctggagcagacgtatcagcggagc
ggagacaatggacaagcccacacacccttgcaggtcaaaacagtctatatgatgctcgac
attttggacaggttcaacctgaaagcccctgttgtggatctgattaatgttcagagacac
tgcataacagcttacccccgcctgattaactatggggaaggttacgacgacatcatcgat
gacaatgggcggggcgggaatatgcttgcaccagcagctacgaccaggatggaagagcac
tacaagaaaatgtacggcgatgaattgcaggttcgcagtgtggtcgaggttctcgaacac
tacaaacattcgcgtgtgccgctggagcaggacattttcgcgtgcatgattcacggtctg
tttgacgaatacgcccattatgtcgactatcctctcgaggccctcgccactacagcagtg
ctcttcggtgggataatctctcacaagttgatatcgagactccccctcaaaattggcttg
ggtatgatcttgcaggccgtcaaggagaatcgtcccgaggagcccatgtacaagttcggt
cttcaggcgctcatgcagctctttggccggctgcgggaatggcctgcgttctgcaaggac
ttgatcctgatacccggactacagggaacggaggcgtacaggaaggcggaagaggtggtt
cgtgagcatgacgaggagttggcccgaacccttcgcaacggtcttccagccatcgccggc
agtgacaagcaactgaccaatggcggtctagaggacagtctcagctcggaacagcaccct
cccccgttcctgtccatcaatgttggcccacctcccgccgggatcagctacgaagacccc
acacccgatgcccagggcaaaatccagtttgctctcaataacgccaccgacacgacccta
cagtcgatattcaaggagctccagaagatgctggatgtcaagcaccagcagtggttcgcc
agtcacctggtagaggagcgcgccaagatgcagccgaactaccaccatgtctacctcgag
ctggtgaagcagtttgaggataggctgctgtggaccgaagttctgagggagacctatgtc
agcgtccagcgcatgctcaactcggagcagacgcagtcgaattcgaccgagaggactcac
ctcaagaatctgggtggctggcttggcctgttgacccttgctcgtgacaagcctatcaag
cacagcaacatcgccttcaggcaactcctgatcgaagccctcgataccaagcgtctcatt
gtcgtcatcccctttgtctgcaaggtcttgacccaggcagccaactcgaacgtgttcaaa
ccgccgaacccctggctcatggacattatccacctcctcattgaactctatcacaacgcc
gagctcaagctcaatctcaagtttgagatcgaggtgctctgcaagtgcctcgatctcgat
catgaggcgatcgagccatctggtgagatcttgaaccggcctcctctcgaggacgtgggt
gacttggttgggccagataatctcgacagttttgagagcctatccctcaacggcatgacg
ggagtgaacagctcacttgtctcgcacccggctcttgccatccccgacttggggcccaac
ctgagcgtcccgtccaccgaggttgtcagcgccgcgaagctgcacgacattgtccgtcaa
gctctcacgcgcgcgctgcaagagatcatccagcctgttgtggataggtctgtgaccatc
gccgccatctctacgcagcaaatgatccgcaaggacttcgcaaccgagggcgacccggac
agggttcggatggctgccgtcaacatggtcaagtctactgctgggagcttggcacttgtg
acctccaaggagccattgcgcgccaacttcaccaactatctccgccagctcgcctcggag
cttcctcagggtctcccagaaggtatcatcatgttgtgtgtcaactccaacatggagctg
gcttccagcatcatcgaaaagtcggctgaggagcgcggtgtccccgagattgaggactta
ctcgcagaagatctcgaggcgcgccgccatcaccgcatcaaccgacccaacgacccattc
atggatccccgcctgaaccgctgggcctggactatccccgctcctttcaagctgcagccc
agcttgagcggcctcaatgatgagcaaatggccatctacgatgattttgctcggcaatca
agggtgactgctgctgcggctgctgccgccgctgccgccgccgccgcctctgttacgcct
tcgcacgttccttcatcgtcggatgcgagatcaattgcaaacgaagtcctcggtgaccag
tacaactcggtgtccaccattcctacccctgctgaaaccccatcgcttccccacatgggc
gtccaacctcagcattaccctccggttcatgctggcatggtcaatggccgacaacctggc
atcagccctgtcgacgctcggaacgtggcggaacgggtgaacagcttgttggaaaagctg
gcgactgccgtcagcaacacggccgaggagcactttgaggacctccctcggacccatgaa
gttatcaacattcatgacgccgtcgtccagcttacaatcaagactcaacagacatctgat
gaatttgcagtctatgtggcgacccaaatctccggtcttctcttccgcccgcagcccgaa
cccacttccctcctcttggagacgctggtccacgtgctggagacgctgcgaaaggttgcg
ggcccggcgacgagtcaacagatccgctggctgttttaccagcagtcaggtagtactttt
ttgaatctgcccctgatctcggcgctgctcagaacggacctcattgattggcacagcatc
gatgcagccatggccaaggcgttgaatgaacggagcagcggttccattgagtttctggag
tccttgatggatcttacgctgttcagcgaggcccctgtcaatctctataccgatttcgtt
cagagcttggaggaagcctgggcgtggataactgaagagcccgaagtgccaggtggccag
cggttcaaggccaaggtgctggggccttcgcccgagattcatcctgaccgaacccccgag
gctcagttcgagcagtttgactacatctttgaggaatgggtgcagctatgcaacaacgac
tgcgcctcggaaaaggctgccacaaagtttgtgcaacagttgaactggcggcggcacatt
gtcaccaaggaggactttttcgtctttgcgaggcaagcaatcgacaaatccgtcgaccgt
gctgagcaaagtggccaccttggtgaaggcttcagcaacgagagcttccaggcagttgac
gctctcgtcaagatgatcctcatcttcactcagtcccacgacgctcctggcaccagcgaa
tcatcgcgtgtcgccttcctggactctgtccttgctcttggtgtgcttgtgttgaacaac
caccacgttagacgcggggacgctttcaacccacgcgtgttcttccgcttcttctccaat
ctcttccaccagattatgaacctgacggagagattctcagacagtgagagcgaaaagata
gtgctcaactttgcggcacgtctatgggaccttcggccggctgtgtaccctggcttcttg
tttcaatggatgggtctcttggctcaccgcgcctttctcccagcgatcatgcgcatgccc
aaccaggcaggctgggagcccttcaccaagctcctcacccatctcttctcttatctcggc
aacatgctgaaagctttcgaagtgtcccttgccgctaaggacctgtactcgggcacggtg
aagcttgtggctgtgcttttccacgacttcccggagtatctttctgccaactatgtgcag
ctatgccagtgcctgccctcgcatgccacacagctcatcaacatgatcttgtcggcgtcc
acgacgccgttcgacaaggtgcccgatccatttcggccgggactcaagattgatcggatc
cccgagatgaaggacccggtggtgagcttttatgactgcgccggccagctcaaggaacta
gggctctatgacatcctggagcagtcattgcaaaacggaccctcggaggacgccatcgcc
caaattacgcacgcgatgcaccacgccgataccgacctgaccacgtttggctttgtgcct
gtcaatgtcgaccgccgagttgtcgacgccgtggtttcccacatcgccaacgcggcctcc
caacgcgctgttaacaacagtgacgcgcccgtgttcgtgtccggggctcccgacgtcaag
actctgcacatgctggtcaccgaggtgccggccgagacacggtactatcttctcagcagc
atggtcaacgaactccggttcgccaacgcgtcgacaaactatttcagccatgccatcgtc
gaaatttttggtcacgatcttgacgacccggaggagacagagattcggcagcagattgtg
cgagttctcttggagcgcatggttgggtactggccccagccatggggtctcgtggtcacg
atcctcgagttgctcaagaatgaaaagtttcatttctttgagctgccgtttatcaaggcg
gctcctgaggttgccgcccgcttcgaggctatcctccgccccgttgtggcgtag
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integrated database retrieval system
