Pandoraea sp. XY-2: DRB87_07110
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Entry
DRB87_07110 CDS
T06086
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pand
Pandoraea sp. XY-2
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pand03000
]
DRB87_07110
Transcription factors [BR:
pand03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DRB87_07110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QBC31173
LinkDB
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Position
complement(1558463..1559458)
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AA seq
331 aa
AA seq
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MKHATLRQLKVFETVARHLSFSRAAEELHLTQPAVSTQVKQLESHVGLPLFEQLGKKVFL
TPAGAEMLHYSRAIIALFRETEEAMDHLKGITGGKLNVAVISAGDYFFPRLLAAFTARHP
GVTLNLTVHNREELLHQLTENLTDLAVMVRPPPEIDTINEAFAPHPYVIVAPPDHPLASQ
RQIPFSRLTEEPFISRERGSDTWNSLQDAFGQRTQRLKITMEIASTETIKQAVVAGMGIS
FLSAHTVGMELQTGQLTVLDVQGFPAWQSWYVVHRRSKRLPPVALAFREFLLAEGAALID
GMMAYKSPVPPPAARGGDHAASRRTDPGSAE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgccacgcttcgtcaactcaaggtcttcgaaaccgtggcgcgccatttgagc
ttttcgcgcgccgccgaagagcttcacctcacgcaaccggccgtctcgacacaggtcaag
cagctcgagagtcacgtcggcctcccgcttttcgagcagttgggcaagaaggtctttctc
acgccggcgggcgccgaaatgctccattacagccgcgcgatcattgcgctctttcgcgaa
accgaagaggcaatggatcacctcaagggcatcacgggcggcaagctcaacgtggccgtg
atcagcgcgggcgactatttctttcccaggttgctcgcggcctttaccgcacgccatccc
ggcgtgacgctcaatctcacggttcacaaccgcgaggaactcctgcatcagctcaccgaa
aacctcaccgatctggcggtgatggtgcgtccgccaccggagatcgacacgatcaacgaa
gccttcgcaccccatccgtatgtcatcgtggcaccgccggatcatccgctggcgagccag
cgtcagattcccttctcgcgtctgacggaagaaccgttcatcagccgcgagcgcggatcc
gacacgtggaattccctgcaggacgccttcggtcagcgcacccagcgactcaagatcacg
atggagatcgccagcacggaaaccatcaagcaagcggtcgtggcgggcatgggcatcagc
ttcctgtcggcccataccgttggcatggagcttcagaccggtcagttgacggtgctcgac
gtccagggctttccggcctggcaaagctggtacgtcgtgcatcgtcgcagcaagcggctg
ccgccggtcgcgctcgccttccgggaattcctgctggccgaaggcgctgcgctcatcgac
ggcatgatggcctacaagagtcccgtgccgcctcccgctgcgcgcggcggcgatcacgcc
gcctcgcgccggacagatcccggatccgccgaatga
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