Pandoraea sp. XY-2: DRB87_20345
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Entry
DRB87_20345 CDS
T06086
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pand
Pandoraea sp. XY-2
Pathway
pand03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DRB87_20345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pand03400
]
DRB87_20345
Enzymes [BR:
pand01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DRB87_20345
DNA repair and recombination proteins [BR:
pand03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DRB87_20345
Prokaryotic type
DRB87_20345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBC33204
LinkDB
All DBs
Position
4491928..4492914
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AA seq
328 aa
AA seq
DB search
MTSRSRAASPSPTDERQRSLFDEPTPVTGTNDTMTPPQPPVDVAASTASAALSPRRRGRP
PKAGAPVTSASMPVTSIAHSVAASADVAGPLKGRVEDQFAALPGEWKTLVAPFVESDAYA
PLCRYVDAEVAAGKTVYPADIFHALRVTSPMDVKVVILGQDPYHGDDHGIAQAHGLAFSV
QRGVRVPPSLRNIYKEIERDLGIAAPPHGNLDAWAKQGVLLLNTTLTVEASNAASHAKPF
KKGGWQACTDTLLKGLAARQAPLVFLLWGSHAQAKAPLLAGHGHLLLEAPHPSPLSAHRG
FLGCGHFSAANAFLEQHGKAPIDWRLPA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacctcacgctcacgcgcggcatcgccatcgcctaccgatgaaaggcaacgctcactg
ttcgacgaaccgacgccagtgaccggcacgaacgacacgatgactccgccgcagcccccc
gtcgatgtcgccgcttccaccgcttctgccgcgctctcaccgcggcgacgcggacgtccg
ccgaaagcgggtgcgccggtgacatctgcatcgatgcccgtcacatcaatcgctcactcg
gtagccgcgagcgccgacgtcgccggcccgctcaagggtcgcgtcgaggatcagttcgcc
gcattgcccggcgagtggaagacacttgtcgcgccgttcgtcgagagcgacgcgtacgcg
ccgctttgccgttacgtcgatgccgaagtcgccgcaggcaagactgtctacccggcggac
atctttcacgcgctgcgcgtgacgtcgcccatggacgtgaaggtcgtgatccttgggcag
gacccctatcacggtgacgatcacggcatcgcgcaagcgcacggcctggcgttttcggtg
cagcgcggcgtgcgcgtgccgccgtcgttgcgaaacatctacaaggaaatcgaacgcgat
ctggggatcgccgcgccgccgcacggcaatctcgatgcctgggcgaaacagggtgtgctg
ttgctcaacacgacgctcacggtggaagcgagcaacgccgcgagtcatgcgaagccgttc
aagaaggggggatggcaagcctgtaccgacacgttgctcaaggggctggccgcccggcaa
gcgccgctcgtcttcctgctgtggggcagccatgcgcaggccaaggcaccgctgctcgcc
ggtcacggtcatctgctgctcgaagccccgcacccctcgccgctctcggcacatcgcggt
ttcctgggctgcggccacttcagcgccgccaatgccttcctcgaacagcacggcaaggcg
cccatcgactggcgcctgccggcgtaa
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