Pandoraea sp. NE5: PanNE5_41860
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Entry
PanNE5_41860 CDS
T10412
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pann Pandoraea sp. NE5
Pathway
pann00020
Citrate cycle (TCA cycle)
pann00190
Oxidative phosphorylation
pann00650
Butanoate metabolism
pann00720
Other carbon fixation pathways
pann01100
Metabolic pathways
pann01110
Biosynthesis of secondary metabolites
pann01120
Microbial metabolism in diverse environments
pann01200
Carbon metabolism
Module
pann_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pann_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pann_M00149
Succinate dehydrogenase, prokaryotes
pann_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PanNE5_41860 (sdhA)
00650 Butanoate metabolism
PanNE5_41860 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PanNE5_41860 (sdhA)
00720 Other carbon fixation pathways
PanNE5_41860 (sdhA)
Enzymes [BR:
pann01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PanNE5_41860 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
FAD_oxidored
NAD_binding_8
NAD_binding_7
Lycopene_cycl
ThiF
Motif
Other DBs
NCBI-ProteinID:
BDD94746
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Position
complement(4687774..4689549)
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AA seq
591 aa
AA seq
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MAAIKNSLPRRRFDVVIVGAGGSGMRASLQLAKAGLSVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCRQAPNAVYELEHFGMPFDRNADGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQQNVAAKTHFFVEWMALDLIRNEDG
DVLGVSALELETGEVYLLEAKCTLFATGGAGRVYAASTNAFINTGDGLGMAARAGIPLED
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVLLDLSHIGAETIMKRLPSIREIALKFANVDAIKEPIPVVPTIHYQ
MGGIPTNYNGQVVVQQNGESTPVNGFYAVGECSCVSVHGANRLGTNSLLDLVVFGRAAGN
HIVDFVKNHGEHKPLPADAGDNAMARLGRLEASSTGEYAQDIANDIRATMQKHAGVFRTS
DLLKEGVDEIKQVAERVSHVHLKDKSKVFNTARMEALEVDNLIEVAKATMIAAEARKESR
GAHAHSDYPERDDANWMRHSLFFSEGNRLDYKPVQLKPLTVDSVPPKARTF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaattaaaaattcgctgccgcgccgccgctttgacgttgtcatcgtgggcgca
ggtggttcgggcatgcgcgcgtcgctgcaactggccaaggccggtctgtcggtcgccgtg
ctgtccaaggtgttccccacccgttcgcataccgtggccgctcagggcggcattggcgcc
tcgctcggcaacatgagcgaagataactggcactaccacttctacgacaccatcaagggc
tccgactggctcggcgaccaggatgcgatcgagttcatgtgccgtcaggcgccgaacgcc
gtctacgaattggaacacttcggcatgccgttcgaccgtaacgcggacggcacgatctac
cagcgcccgttcggcggtcacacggccaattacggcgagaagccggtccagcgcgcttgc
gcggccgccgaccgtaccggtcacgcgctgctgcacacgctgtatcaacagaacgtggcc
gccaagacgcacttcttcgtggagtggatggcgctcgacctgattcgcaacgaagacggc
gacgtgctcggtgtgtcggcgctcgaactcgaaaccggcgaagtctacctgctcgaagcc
aagtgcacgctgttcgcgaccggcggtgccggccgtgtgtacgccgcctcgaccaacgcg
ttcatcaacaccggtgatggtcttggcatggccgcgcgtgcgggcattccgctcgaagac
atggaattctggcaattccacccgactggcgtggccggtgcgggcgtgctgattaccgaa
ggcgtgcgcggtgagggcggtattctgcgcaactcgaacggcgagcgcttcatggagcgc
tatgccccgacgctgaaggatctggcgccgcgtgacttcgtgtcgcgctcgatggaccag
gaaatcaaggaaggccgtggctgcggcccgaacggcgactacgtgctgctcgacctctcg
cacatcggtgccgagacgatcatgaagcgcctgccgtcgattcgcgaaatcgccctgaag
ttcgctaacgtcgacgcgatcaaggaaccgatccccgtcgtgccgaccatccactaccag
atgggtggcattccgacgaactacaacggccaggttgtcgtgcagcagaacggcgaatcg
accccggtcaacggcttctacgccgtgggcgagtgctcctgcgtgtctgtccacggtgcc
aaccgtctgggcacgaactcgctgctcgacctcgtggtgttcggccgcgcggccggtaac
cacatcgtcgacttcgtgaagaaccacggcgagcacaagccgctgcccgccgatgccggc
gacaacgccatggcgcgtctgggccgtctggaagcctccagcacgggcgagtacgcacag
gacatcgccaacgacatccgcgcgacgatgcagaagcacgccggcgtgttccgtacgtcc
gacctgctcaaggaaggcgtggacgagatcaagcaagtggccgagcgcgtgtcgcacgtt
cacctgaaggacaagtcgaaggtgttcaacacggcgcgcatggaagcgctggaagtggac
aacctgatcgaagtggccaaggccaccatgatcgcagccgaagcccgcaaggaaagccgt
ggcgcgcacgcgcacagcgattatccggagcgtgacgacgccaactggatgcgccactcg
ctgttcttcagcgaaggcaaccgtctggattacaagccggtgcagttgaagccgctgacc
gtcgactcggttccgcccaaggcgcggacgttctaa
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