KEGG   Pantoea sp. PSNIH2: PSNIH2_12035
Entry
PSNIH2_12035      CDS       T03514                                 
Name
(GenBank) endonuclease VIII
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
panp  Pantoea sp. PSNIH2
Pathway
panp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:panp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PSNIH2_12035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:panp03400]
    PSNIH2_12035
Enzymes [BR:panp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PSNIH2_12035
DNA repair and recombination proteins [BR:panp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PSNIH2_12035
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N
Other DBs
NCBI-ProteinID: AIX74432
LinkDB
Position
complement(2607455..2608243)
AA seq 262 aa
MPEGPEIRRAADRLEEAIVGKPLTDVWFAFTQLKTYEKALIGETVTAIETRGKALLTHFS
NGLTLYSHNQLYGVWRVVETGSEAQTQRVLRVRLACVDQTILLYSASDIEMHNSDTLAAH
PFLQRIGPDVLDMRLTEEEVRERLLSPRFRRRQFSGLLLDQAFLAGLGNYLRVEILWEAE
LAPQHRAQDLTEPQLRRLSQALLAIPRHSYRMRGTMKSAHHEAAFRFKVFHRAGKTCERC
GGVIEKSTLSSRPFYWCPGCQL
NT seq 789 nt   +upstreamnt  +downstreamnt
atgccagaaggaccagagattcgccgcgcggcggatcggctggaggaagccattgtcggc
aaaccgttgacggatgtgtggtttgcctttacgcagttgaaaacctatgaaaaggctctg
atcggcgagacggtcactgcgatagaaacgcgtggcaaggcattgctgacgcacttctcc
aacgggctgacgctctacagccataaccagctgtatggcgtctggcgggtggtggaaacc
ggcagcgaagcgcagacgcagcgggtgctacgggtgcgcctcgcctgcgtggaccagacg
attctgctctacagcgcatcggatattgagatgcataacagcgatacgctggcggcgcac
ccgtttttacagcgtatcggccccgatgtgctggatatgcgcctgacggaggaggaggtg
cgcgagcgtctgctttcgccgcgtttccggcggcgtcagttcagcggtctgctgctcgat
caggcttttctggcggggttgggcaactacctgcgggtggagattttgtgggaggcggag
ctggcgccgcagcatcgcgcgcaggatctgaccgagccgcagctgcggcgtttatcgcag
gcgctgctggcgattccacgccattcctaccgcatgcgcggcacgatgaaaagcgcgcac
cacgaggcggcctttcgctttaaagtttttcatcgcgcgggtaaaacgtgcgaacgctgc
ggcggcgtcattgaaaagagcacgctctcttcgcgccccttttactggtgtcccggctgc
cagctttag

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