Pantoea sp. PSNIH2: PSNIH2_12035
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Entry
PSNIH2_12035 CDS
T03514
Name
(GenBank) endonuclease VIII
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSNIH2_12035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_12035
Enzymes [BR:
panp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PSNIH2_12035
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSNIH2_12035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AIX74432
LinkDB
All DBs
Position
complement(2607455..2608243)
Genome browser
AA seq
262 aa
AA seq
DB search
MPEGPEIRRAADRLEEAIVGKPLTDVWFAFTQLKTYEKALIGETVTAIETRGKALLTHFS
NGLTLYSHNQLYGVWRVVETGSEAQTQRVLRVRLACVDQTILLYSASDIEMHNSDTLAAH
PFLQRIGPDVLDMRLTEEEVRERLLSPRFRRRQFSGLLLDQAFLAGLGNYLRVEILWEAE
LAPQHRAQDLTEPQLRRLSQALLAIPRHSYRMRGTMKSAHHEAAFRFKVFHRAGKTCERC
GGVIEKSTLSSRPFYWCPGCQL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggaccagagattcgccgcgcggcggatcggctggaggaagccattgtcggc
aaaccgttgacggatgtgtggtttgcctttacgcagttgaaaacctatgaaaaggctctg
atcggcgagacggtcactgcgatagaaacgcgtggcaaggcattgctgacgcacttctcc
aacgggctgacgctctacagccataaccagctgtatggcgtctggcgggtggtggaaacc
ggcagcgaagcgcagacgcagcgggtgctacgggtgcgcctcgcctgcgtggaccagacg
attctgctctacagcgcatcggatattgagatgcataacagcgatacgctggcggcgcac
ccgtttttacagcgtatcggccccgatgtgctggatatgcgcctgacggaggaggaggtg
cgcgagcgtctgctttcgccgcgtttccggcggcgtcagttcagcggtctgctgctcgat
caggcttttctggcggggttgggcaactacctgcgggtggagattttgtgggaggcggag
ctggcgccgcagcatcgcgcgcaggatctgaccgagccgcagctgcggcgtttatcgcag
gcgctgctggcgattccacgccattcctaccgcatgcgcggcacgatgaaaagcgcgcac
cacgaggcggcctttcgctttaaagtttttcatcgcgcgggtaaaacgtgcgaacgctgc
ggcggcgtcattgaaaagagcacgctctcttcgcgccccttttactggtgtcccggctgc
cagctttag
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