Pantoea sp. PSNIH2: PSNIH2_17610
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Entry
PSNIH2_17610 CDS
T03514
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panp03032
]
PSNIH2_17610 (gyrB)
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_17610 (gyrB)
Enzymes [BR:
panp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSNIH2_17610 (gyrB)
DNA replication proteins [BR:
panp03032
]
Prokaryotic type
DNA Topoisomerases
PSNIH2_17610 (gyrB)
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSNIH2_17610 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AIX75396
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Position
3802274..3804682
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AA seq
802 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIV
VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELTIRREGKVHQQTYVHGVPQAPLAVTGETDLTGTRVRFWPSHQTFTNVT
DFEYEILAKRLRELSFLNSGVSIRLEDKRTDKSDHYHYEGGIKAFVEYLNKNKNPIHPNV
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESQMNELLAEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIAIALDGATLHTNASAPALGGEQLENLVSDYNSTQRMIKRMERR
FPLALLNALVYHPTLESLDNQQTVTTWIETLVTLLNERETHGSTYVASVRENRELNIFEP
VLRVRTHGVDTDYPLDSEFIQGPEYRKICALGGKLRGLLEEDAYIERGERRQPVASFEQA
LEWLVKESRRGLAVQRYKGLGEMNPEQLWETTMDPDSRRMLRVTIKDAIAADQLFTTLMG
DAVEPRRAFIEENALKAANIDI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtatcaaagtcctgaaagggcttgatgcggtacgc
aaacgcccgggaatgtatatcggcgatacggatgacggcaccggtctgcatcacatggta
ttcgaggtcgtggacaacgccatcgacgaagcgctcgcaggccactgtaaagagattgtc
gtgactatccatgcggataactccgtatcggtgcaggatgacggccgcggcattcctacc
gggattcacccggaagaaggcgtgtcggcggcggaagtgatcatgaccgtgctgcacgcc
ggcggtaagttcgacgacaactcctataaagtttccggcggcctgcacggtgtgggcgtt
tctgtagttaacgcgctgtctgaaaagctggagctgactattcgccgcgaaggcaaagtg
caccagcagacctatgttcacggcgtgccgcaggcgccgctggcggtcaccggcgaaacc
gatctgaccggtacccgcgtgcgcttctggccaagccatcagacctttaccaacgtcacc
gatttcgaatatgaaattctggcgaagcgtctgcgcgagctgtcgttcctgaactccggc
gtctctatccgcctggaagacaaacgtactgacaagagcgaccactatcactacgaaggc
ggcatcaaagctttcgttgaatacctgaacaaaaacaaaaacccgatccatccgaacgtc
ttctacttctctactgagaaagacggcatcggcgtggaagtggcattgcagtggaacgac
ggtttccaggaaaacatctactgcttcaccaacaacattccgcagcgcgacggcggcacg
cacctggctggcttccgcgccgccatgacgcgtaccctgaacgcctatatggataaagaa
ggctacagcaaaaaagcgaaggtcagcgctaccggcgacgacgcgcgcgaagggctgatc
gctgtcgtttccgtgaaggtgccggacccgaaattctcctcgcagaccaaagacaaactg
gtttcttccgaggtgaaatcggcggttgaatcgcagatgaacgaactgctggcggaatac
ctgctggaaaacccgtccgatgcgaaaatcgtggtcggcaaaattattgatgcggcgcgc
gcgcgcgaagcagcccgtcgcgcccgtgaaatgacccgtcgtaaaggcgcgctggatctg
gcgggcctgccgggcaaactggccgactgtcaggagcgcgatccggcgctgtcggaaatc
tacctggtggagggtgactccgcaggcggttccgccaagcagggccgtaaccgtaagaac
caggcgattctgccgctaaaaggtaaaatcctgaacgtggagaaggcgcgcttcgacaag
atgctggcgtcacaggaagtcgctacgctgatcaccgcgctgggctgcggcattggccgc
gacgagtacaacccggacaagctgcgctatcacagcatcattatcatgaccgatgcggac
gtcgacggctcgcacattcgtacgctgctgttgaccttcttctatcgtcagatgccagaa
atcattgagcgcggccacgtctatatcgcgcagccgccgctctacaaggtgaaaaaaggc
aagcaggagcagtacatcaaggatgatgaggcgatggatcagtatcagatcgccattgcg
ctggacggcgcgacgctacacaccaacgccagcgcgccggcgctcggcggcgaacagctg
gaaaacctggtctccgactacaacagcacgcagcgcatgatcaagcgtatggagcgccgc
ttcccgctcgcgctgcttaacgcgctggtttaccatccgacgctggaaagcctggacaac
cagcagacggtgacgacctggatcgagacgctggttacgctgctgaacgaaagagaaacg
cacggcagtacctatgtcgccagcgtgcgtgaaaaccgcgagctgaacatcttcgaaccg
gtgctgcgcgtgcgcacgcacggcgtggataccgattatccgctggacagcgagtttatc
cagggcccggaataccgcaaaatctgcgcgctgggtggaaaactgcgcggcctgctggaa
gaagacgcctacatcgaacgcggcgagcgccgtcagccggtcgccagcttcgagcaggcg
ctggagtggctggtgaaagagtcgcgtcgcggcctggcagtacagcgctataaaggtctg
ggtgagatgaacccggaacagctgtgggaaaccactatggacccggacagccgtcgcatg
ctgcgtgttacgattaaagatgcgatcgccgccgatcagctgtttaccacgctgatgggc
gatgcggttgaaccgcgccgcgcctttatcgaagagaacgccctgaaagcggcgaatatc
gatatttaa
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