Pantoea sp. At-9b: Pat9b_2984
Help
Entry
Pat9b_2984 CDS
T01386
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pao
Pantoea sp. At-9b
Pathway
pao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pat9b_2984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pao03400
]
Pat9b_2984
Enzymes [BR:
pao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pat9b_2984
DNA repair and recombination proteins [BR:
pao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pat9b_2984
Prokaryotic type
Pat9b_2984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADU70283
LinkDB
All DBs
Position
3272816..3273493
Genome browser
AA seq
225 aa
AA seq
DB search
MTEKLTWHDVLAEEKEKPYFVETLKAVANERAAGVTVYPPQKDVFNAFRLTELGDIKVVI
LGQDPYHGPNQAHGLAFSVLPGVAIPPSLLNMYKELEQDIPGFVRPQHGFLESWAKQGVM
LLNTVLTVQAGQAHSHARFGWETFTDNVISAINQHREGVIFLLWGSHAQKKGSIIDRQRH
HVLKAPHPSPLSAHRGFFGSKHFSQANALLGQAGQAPIDWTPVLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaagctgacctggcacgatgtgctggctgaagagaaagagaaaccttacttt
gtggagacgctgaaagcggtcgccaacgagcgcgcggcgggcgtcacggtctatccgccg
caaaaagatgtcttcaatgcctttcgtctgaccgaactgggcgatattaaagtggtgatc
ctgggtcaggacccttatcacggcccaaaccaggctcatggactggctttttccgtgctg
cctggcgtcgctatcccgccctcgctgctgaatatgtataaggagctggaacaggatatt
cccgggtttgtgcggccacagcatggatttttggagagctgggcaaagcagggggtaatg
ctgttgaacaccgtattaacggtgcaggcgggccaggcccattcgcatgcgcgttttggc
tgggaaacctttaccgacaacgtgatcagtgcgatcaatcagcatcgtgaaggggtgatt
tttctgctgtggggatcccatgcgcagaagaaaggcagcatcatcgatcgccagcgccat
cacgtgttgaaagcaccacatccttcgccgctttccgcgcaccgcggctttttcggtagc
aaacatttttcacaggccaacgccttgctgggccaggccgggcaagcgcctatcgactgg
acgccggtgctaccgtga
DBGET
integrated database retrieval system
