Pantoea sp. At-9b: Pat9b_3729
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Entry
Pat9b_3729 CDS
T01386
Name
(GenBank) ABC transporter related protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pao
Pantoea sp. At-9b
Pathway
pao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pat9b_3729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_3729
Transporters [BR:
pao02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pat9b_3729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_22
AAA_29
AAA_25
AAA_16
AAA_23
RsgA_GTPase
TsaE
nSTAND3
nSTAND1
MMR_HSR1
AAA_33
AAA
DUF5906
Mg_chelatase
SbcC_Walker_B
ATP-synt_ab
NACHT
PRK
DUF2813
DUF87
AAA_5
AAA_24
Sigma54_activat
CbiA
Motif
Other DBs
NCBI-ProteinID:
ADU71019
UniProt:
E6WH31
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Position
4065084..4066706
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AA seq
540 aa
AA seq
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MMQPILEMRDLRIETDQGIPLVQGISLSLKPGEVLGLIGESGAGKSTIGLAALGYARSGC
RIAGGEVRIAGQDIVPLSSKEKRDIRGRRVAYVAQSAAAAFNPALTIGKQVCEGPIRHGL
MNAEEAQAWAVTLFRALDLPQPDTIGQRYPHQLSGGQLQRAMAAMAMSCKPDLLVMDEPT
TALDVTTQIEVLVMLRKLVREFNTAALYITHDLAVVAQIADRIMVLRQGSEVECGSTADI
LQNPLESYTQRLVSERAHALTAVHAENVAQGPLLTLQNLSTGYNGKTVVRGVSMSIAKGE
TLAIIGESGSGKSTLARALCGLLGDTAGNVSFAGQVLANRYQQRDKETLRRIQMIYQLPD
VALNPRQTILEAIGRPIAFYFGLDKRQVRARVEELLRLTELPLTLMDRYPSALSGGQKQR
VCIARALAAEPELIICDEATSALDPLVAEEVLNLLRRLQEQLGLSYLFITHDLSTVKRIA
QQVAVMYQGNVVAQGPTEQVFSAPMHSYTEKLLTSVPEMRTSWLDEVLGQRQNNAMAGAS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaccgattctggaaatgcgcgatctgcgcattgaaaccgaccagggtattcca
ctggtgcagggtatttcactcagcctgaaacccggcgaagtgctggggctgattggcgaa
tccggtgccggtaaatccactatcggcctcgccgcgctgggctatgcccgctccggctgc
cgtattgccggtggcgaagtgcgtatcgccggacaggatattgtgccgctctccagcaaa
gagaaacgtgacattcgcggcagacgcgtggcctatgtggcacaaagcgccgccgcggcg
tttaacccggcactgactatcggtaaacaggtgtgcgaaggcccgatccgccacggcctg
atgaacgccgaagaagcacaggcatgggcggtgacgctgttccgtgcgctggatctgccg
cagccggacaccatcggccagcgctatccgcaccaattatcgggcggtcagctacagcgc
gcgatggcagcaatggcgatgtcctgtaaacctgacctgctggtaatggatgaaccgacc
accgcgctggacgtcaccacgcaaattgaagtgctggtgatgctgcgcaagctggtacgt
gaattcaacaccgctgcgctgtacatcacgcatgacctggcggtggtggcgcaaattgct
gaccgcatcatggtgctgcgccagggcagcgaagtggaatgcggcagcaccgctgacatt
ctgcaaaatccgctggaaagctatacccaacgtctggtgtcggagcgcgcccatgcgctg
acggcggtacacgccgaaaacgtggcgcagggaccactgctgacgctgcaaaatctctcc
accggttacaacggtaaaaccgtggtacgcggcgtgtcgatgagcattgccaaaggtgaa
accctggcgattatcggcgaatccggcagtggcaaaagtaccctggcgcgtgcgttgtgt
ggcttgctgggcgataccgccggtaacgtcagctttgccggacaggtgctggcgaaccgt
tatcagcagcgtgataaagaaacgctacgccgtatccagatgatttatcagttgccggat
gtggcgctcaacccgcgccagaccatcctggaagccatcggtcgcccgattgccttctac
tttgggctggataagcgccaggtacgtgcacgcgtggaagaactgctgcgcctgactgag
ttaccgctcacgctgatggatcgctacccctccgcgctgtcgggtggtcaaaagcagcgc
gtctgcatcgcccgcgcactggccgccgagccggaattgatcatctgtgacgaagccacc
tccgcgctcgatccgctggtggcggaagaggtactgaatctgctgcgtcgtttgcaggag
caactgggcctgtcgtacctgtttatcactcacgatctcagcaccgtgaagcgcatcgcg
cagcaagtggcggtgatgtatcagggcaacgtggtagcacagggaccgaccgagcaagta
ttcagcgccccgatgcacagctacaccgaaaaactactgacctcagtgccggaaatgcgc
acctcatggctggatgaagtgctgggtcagcgtcagaacaacgcaatggctggagcctca
tga
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